Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000129.1 Kokia drynarioides strain JFW-HI SEQ_110775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83224

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1478--1580
41
2.5
41
88
0
152
19
25
23
32
1.98
7133--7181
21
2.5
19
80
12
55
30
0
22
46
1.52
7906--8499
295
2.0
295
92
1
996
38
14
14
31
1.88
15794--15854
25
2.5
25
83
2
79
37
4
6
50
1.50
22067--22160
30
3.1
30
78
6
93
35
7
25
31
1.84
22078--22160
30
2.7
30
83
1
103
33
7
24
34
1.83
22089--22224
30
4.6
30
74
9
82
38
6
21
33
1.79
31860--31918
31
1.9
31
82
6
75
50
8
5
35
1.55
32599--32737
57
2.5
57
91
1
217
31
16
11
40
1.84
43453--43496
17
2.5
18
85
7
63
31
40
2
25
1.68
48052--48079
3
9.3
3
100
0
56
32
0
0
67
0.91
48353--48386
18
1.9
18
88
5
52
35
0
2
61
1.11
48476--48522
19
2.4
19
80
20
53
29
0
4
65
1.11
48343--48599
10
27.8
9
68
16
102
29
2
5
62
1.29
48487--48531
19
2.4
19
88
0
63
31
0
4
64
1.13
48476--48590
44
2.6
42
82
8
131
26
0
3
69
1.04
54545--54609
5
13.0
5
96
0
85
0
52
0
47
1.00
64041--64179
53
2.6
54
84
6
174
33
7
12
47
1.68
66637--66753
62
1.9
62
98
0
225
17
17
35
29
1.93
68089--68135
23
2.0
24
83
4
60
76
12
8
2
1.09
68287--68345
26
2.3
26
96
0
109
44
11
22
22
1.85
69029--69093
30
2.2
30
100
0
130
21
27
29
21
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69274--69360
19
4.5
20
75
15
85
4
2
20
72
1.14
69331--69390
22
2.9
19
80
11
57
8
5
20
66
1.37
69409--69479
22
3.2
24
79
15
73
9
1
18
70
1.22
69343--69479
43
3.1
43
78
9
152
8
3
17
70
1.28
69594--69624
15
2.0
16
93
6
55
35
0
0
64
0.94

Tables:   1

The End!