Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012901.1 Kokia drynarioides strain JFW-HI SEQ_127915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77317

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1234--1678
29
15.1
29
79
8
384
32
2
29
35
1.72
1233--1674
59
7.5
58
80
7
401
32
2
28
35
1.72
1234--1678
88
5.0
87
80
6
430
32
2
29
35
1.72
2693--2725
15
2.1
16
88
5
50
42
0
3
54
1.15
3551--3633
6
13.8
6
71
11
55
50
4
2
42
1.36
3549--3634
17
4.8
18
76
8
86
51
5
2
40
1.39
4037--4559
205
2.6
204
88
1
771
21
20
20
38
1.94
4469--4681
85
2.5
85
92
0
354
26
23
14
35
1.93
4400--4774
85
4.4
87
79
11
307
25
21
16
36
1.94
5390--5449
27
2.2
27
84
3
75
56
8
16
18
1.64
16580--16976
59
6.8
58
76
11
158
36
3
25
34
1.74
16698--17191
29
16.9
29
77
9
427
33
2
28
34
1.72
25088--25484
59
6.8
58
76
11
158
36
3
25
34
1.74
25206--25699
29
16.9
29
77
9
427
33
2
28
34
1.72
26665--26697
15
2.1
16
88
5
50
45
0
0
54
0.99
26664--26748
18
4.8
18
70
16
63
43
3
1
51
1.26
26705--26760
21
2.6
21
71
2
58
37
10
3
48
1.56
27489--27542
16
3.2
16
80
19
65
44
3
0
51
1.19
27500--27582
6
13.8
6
71
11
55
50
4
2
42
1.36
27498--27583
17
4.8
18
76
8
86
51
5
2
40
1.39
28967--29236
30
9.2
29
80
5
256
34
30
2
33
1.72
28967--29236
89
3.1
87
83
6
296
34
30
2
33
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28979--29236
59
4.4
59
83
5
301
35
29
2
32
1.70
28968--29295
59
5.6
58
76
12
160
33
29
3
32
1.75
32009--32055
21
2.2
21
85
7
60
55
4
6
34
1.45
36529--36586
29
2.0
30
86
3
82
27
6
17
48
1.72
36534--36596
29
2.1
29
82
8
74
30
9
14
46
1.76
39064--39094
16
1.9
16
93
0
53
64
3
19
12
1.41
41254--41298
7
6.4
7
94
0
81
28
13
31
26
1.94
42076--42118
18
2.4
18
88
7
61
53
0
0
46
1.00
42606--42645
16
2.5
17
88
12
66
35
0
0
65
0.93
49672--49730
29
2.0
29
93
0
100
35
23
16
23
1.95
54962--55026
16
4.2
16
70
14
57
70
1
1
26
1.04
57483--57509
4
6.8
4
100
0
54
48
25
0
25
1.52
60370--60445
39
1.9
39
82
10
93
53
1
3
40
1.27
63872--63977
27
3.8
26
78
12
86
27
4
3
64
1.31
63871--63952
37
2.2
38
78
6
87
26
4
2
65
1.25
63872--63987
29
4.1
29
78
8
96
29
4
3
62
1.30
72006--72040
18
2.0
18
88
5
54
51
0
0
48
1.00
76036--76130
6
16.5
6
69
16
58
44
1
3
51
1.24
76003--76130
17
7.4
17
79
7
132
42
0
3
52
1.25

Tables:   1

The End!