Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012912.1 Kokia drynarioides strain JFW-HI SEQ_127928, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62588

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18732--18775
19
2.4
19
80
3
54
63
4
0
31
1.14
30441--30480
12
3.6
12
83
16
59
30
0
0
70
0.88
30446--30486
21
1.9
21
85
5
55
31
0
2
65
1.05
30633--30679
12
3.9
12
76
18
53
29
0
4
65
1.11
31081--31129
16
3.2
16
72
21
59
61
8
0
30
1.25
31162--31248
29
2.9
30
66
10
79
34
6
11
47
1.67
32453--32537
43
2.0
43
83
4
109
31
10
9
48
1.70
33008--33049
18
2.3
19
83
4
50
57
9
30
2
1.44
33109--33200
45
2.0
45
85
0
121
32
27
17
22
1.96
33192--33251
21
2.9
21
100
0
120
23
43
8
25
1.81
34437--34483
24
2.0
24
100
0
94
17
17
21
44
1.86
35459--35523
28
2.2
30
86
10
89
23
7
32
36
1.83
35535--35768
59
3.9
59
81
8
210
33
3
29
33
1.76
35534--35768
30
7.9
30
77
11
200
33
3
29
33
1.76
35530--35773
29
8.2
29
76
14
198
31
4
30
33
1.78
35639--35798
59
2.7
60
82
5
166
30
3
31
35
1.75
36917--37001
3
28.0
3
74
7
73
31
1
2
64
1.13
36958--37010
24
2.2
24
82
0
61
30
0
1
67
1.01
37720--37766
17
2.8
17
86
0
76
53
4
0
42
1.20
37706--37752
23
2.0
23
84
8
60
53
4
0
42
1.20
38453--38490
19
2.0
20
89
5
60
28
5
7
57
1.49
38498--38570
36
2.1
36
87
7
105
46
2
4
46
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50605--50629
2
12.5
2
100
0
50
48
0
0
52
1.00
50958--51009
20
2.6
21
81
9
63
53
3
0
42
1.19
51014--51039
2
13.0
2
100
0
52
50
0
0
50
1.00
57859--57899
15
2.9
15
82
10
50
60
4
0
34
1.18
58471--58528
30
1.9
30
92
0
98
43
5
3
48
1.42
58927--59014
41
2.2
40
81
15
103
34
2
3
60
1.26
58927--59022
42
2.4
41
81
13
110
35
2
4
58
1.29
58947--59042
42
2.3
41
81
12
108
33
5
5
56
1.44
60352--60390
16
2.5
15
80
19
53
64
0
0
35
0.94

Tables:   1

The End!