Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012927.1 Kokia drynarioides strain JFW-HI SEQ_127944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  113586

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4664--4703
18
2.2
18
95
0
71
25
20
20
35
1.96
5479--5640
48
3.3
48
84
8
207
20
26
15
37
1.93
5510--5640
24
5.2
24
75
8
127
19
26
16
36
1.93
5543--5625
29
3.0
29
76
11
95
18
31
16
33
1.93
6136--6196
19
3.1
19
71
7
50
11
16
0
72
1.13
10109--10185
40
1.9
40
86
5
111
50
2
3
42
1.34
10066--10523
185
2.5
185
96
0
826
47
4
4
43
1.43
10294--10370
40
1.9
40
86
5
111
50
2
3
42
1.34
10787--10811
5
5.0
5
100
0
50
40
0
0
60
0.97
18733--18781
24
2.1
24
88
3
73
59
12
0
28
1.34
20192--20217
2
13.0
2
100
0
52
0
50
0
50
1.00
20899--20957
26
2.1
28
87
9
86
27
6
6
59
1.48
20918--20986
35
1.9
36
82
2
86
26
7
8
57
1.54
30184--30230
25
1.9
25
86
4
69
34
4
4
57
1.38
30553--30590
18
2.1
18
85
9
51
21
10
18
50
1.76
30624--30669
23
2.0
23
82
0
56
34
17
13
34
1.88
30748--30794
21
2.1
23
84
7
62
51
0
25
23
1.49
31331--31478
73
2.0
73
100
0
296
28
14
26
30
1.95
35637--35688
20
2.6
20
87
0
68
26
26
11
34
1.91
38738--38791
20
2.7
20
85
0
72
29
24
9
37
1.86
39183--39236
20
2.7
20
88
0
72
27
24
11
37
1.89
38444--39334
445
2.0
446
95
0
1613
36
13
15
33
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40538--40582
16
2.6
17
82
6
56
48
4
0
46
1.22
41027--41059
2
17.0
2
87
6
50
45
3
0
51
1.16
43060--43102
19
2.3
19
84
8
52
58
4
0
37
1.19
44621--44653
14
2.3
15
89
5
50
78
0
3
18
0.87
48266--48309
21
2.1
21
91
0
70
31
11
11
45
1.76
50670--50712
19
2.3
19
84
8
52
58
4
0
37
1.19
54605--54661
29
1.9
30
85
3
80
42
8
17
31
1.80
54750--54803
28
2.0
28
81
3
65
40
7
25
25
1.82
60579--60715
61
2.2
62
82
1
177
48
10
10
31
1.70
60579--60718
62
2.3
61
83
1
181
47
10
10
32
1.70
66700--66729
15
2.0
15
93
0
51
63
0
20
16
1.31
68654--68708
18
3.1
18
78
0
65
29
5
40
25
1.78
69818--69862
12
3.8
12
100
0
90
26
42
8
22
1.83
70439--70507
31
2.3
31
80
7
79
63
1
0
34
1.03
81852--81925
31
2.5
30
84
4
87
41
22
12
22
1.87
81865--81925
31
2.0
31
90
0
95
44
22
8
24
1.80
85690--85769
31
2.7
29
79
9
79
42
13
8
35
1.76
87095--87332
51
4.6
51
83
4
282
28
23
15
32
1.95
96381--96472
46
2.1
43
86
10
123
36
20
5
36
1.76
98211--98252
17
2.4
17
88
4
57
50
2
23
23
1.61
110862--111068
102
2.0
102
99
0
405
16
15
26
41
1.88

Tables:   1

The End!