Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012932.1 Kokia drynarioides strain JFW-HI SEQ_127950, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23521

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--199
12
3.7
12
81
0
52
40
0
0
59
0.98
152--202
18
2.7
18
87
9
66
39
0
0
60
0.97
159--202
21
2.1
21
91
0
70
43
0
0
56
0.99
868--977
17
6.4
17
81
7
123
52
3
0
42
1.25
868--945
6
13.5
6
73
17
67
51
1
1
46
1.17
886--944
11
5.2
11
80
10
66
54
1
1
42
1.20
868--977
52
2.1
52
86
0
148
52
3
0
42
1.25
868--977
35
3.2
35
80
12
120
52
3
0
42
1.25
1396--1772
205
1.8
206
89
1
596
20
21
20
37
1.94
13304--13361
28
2.1
28
93
6
100
29
10
29
31
1.90
13452--13563
17
6.4
17
83
4
143
41
0
2
54
1.20
13485--13563
6
13.7
6
75
12
76
41
1
2
54
1.22
13505--13560
11
4.9
11
80
10
51
37
1
3
57
1.27
13485--13563
23
3.4
23
77
11
56
41
1
2
54
1.22
15373--15640
29
9.2
29
69
15
185
32
29
7
30
1.84
15367--15634
59
4.6
58
87
4
387
32
29
7
31
1.84
16531--16734
30
6.9
29
73
15
154
33
4
27
33
1.77
16531--16726
59
3.3
58
87
5
270
34
4
28
33
1.76
18314--18376
6
11.0
6
75
16
62
52
1
0
46
1.10
18332--18376
17
2.6
17
92
0
72
55
2
0
42
1.12
18314--18365
23
2.3
23
86
6
70
50
1
0
48
1.12
18333--18410
17
4.6
16
82
6
66
55
5
0
39
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22943--22978
18
2.1
18
89
5
56
33
25
0
41
1.55

Tables:   1

The End!