Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012938.1 Kokia drynarioides strain JFW-HI SEQ_127956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89200

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3844--3965
43
2.8
44
83
2
174
29
9
19
41
1.82
3982--4015
13
2.6
13
95
0
59
55
8
17
17
1.66
8889--9578
343
2.0
343
95
0
1236
31
17
18
33
1.94
11515--11569
23
2.4
23
87
0
74
29
23
21
25
1.99
17237--17280
14
3.0
14
81
12
52
20
2
2
75
1.03
17237--17274
16
2.5
16
87
8
53
21
2
0
76
0.91
18661--18689
10
2.7
11
89
10
51
79
0
20
0
0.74
19427--19481
23
2.4
23
84
0
65
32
23
18
25
1.97
21162--21444
82
3.4
80
77
10
275
32
12
12
43
1.80
23607--23636
14
2.1
14
100
0
60
36
43
0
20
1.52
23631--23686
29
1.9
29
92
0
94
26
16
26
30
1.96
25475--25500
2
13.0
2
100
0
52
50
0
0
50
1.00
25712--25756
19
2.4
19
81
7
56
37
0
4
57
1.19
26551--26611
22
2.8
22
90
7
90
16
11
0
72
1.13
26556--26585
16
1.9
16
93
6
53
16
13
0
70
1.18
27225--27262
18
2.2
17
90
4
58
60
2
0
36
1.11
32559--32618
21
2.8
22
82
7
61
73
1
8
16
1.16
33421--33463
19
2.3
19
84
8
52
58
2
0
39
1.11
44994--45113
58
2.1
58
95
0
213
37
3
7
51
1.47
47644--47700
26
2.2
25
82
14
71
38
0
0
61
0.96
50850--51406
30
18.9
30
78
8
545
35
1
27
35
1.67
50850--51406
59
9.4
60
84
6
567
35
1
27
35
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50850--51406
118
4.7
117
83
7
632
35
1
27
35
1.67
52356--52386
3
10.3
3
92
0
53
35
0
0
64
0.94
52395--52468
31
2.4
30
82
12
89
43
2
2
51
1.30
53176--53206
16
1.9
16
93
0
53
54
3
0
41
1.16
53172--53213
22
2.0
21
85
4
57
54
2
4
38
1.34
58718--58758
22
1.9
22
85
5
57
48
36
2
12
1.54
59346--59386
21
2.0
21
90
0
64
46
14
4
34
1.66
59443--59561
58
2.1
58
95
0
211
28
21
20
30
1.98
60012--60089
37
2.1
37
88
4
113
23
10
24
42
1.85
62648--62692
15
2.9
16
75
18
51
4
11
2
82
0.91
62648--62702
16
3.4
16
75
5
56
5
12
1
80
0.97
65599--65629
3
10.3
3
100
0
62
67
0
0
32
0.91
70629--70684
24
2.3
24
93
0
94
32
7
25
35
1.83
78687--78717
15
2.1
15
93
0
53
35
22
12
29
1.91
79814--79854
21
2.1
18
86
13
55
70
0
29
0
0.87
80834--80887
18
3.1
18
81
5
65
24
9
11
55
1.64
80827--80877
18
3.0
17
83
8
68
23
11
11
52
1.70
80834--80887
17
3.1
17
83
2
54
24
9
11
55
1.64
83606--83655
24
2.2
23
80
13
59
22
10
12
56
1.65
89031--89076
24
1.9
24
86
0
65
30
4
10
54
1.55

Tables:   1

The End!