Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012942.1 Kokia drynarioides strain JFW-HI SEQ_127960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8534

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1045--1093
3
15.7
3
85
8
62
32
4
0
63
1.13
1043--1103
26
2.3
26
94
0
104
34
6
0
59
1.24
1751--1818
6
11.5
6
73
19
54
48
2
1
47
1.26
1752--1832
17
4.6
17
83
6
76
51
3
1
43
1.27
1752--1832
34
2.3
36
83
8
96
51
3
1
43
1.27
2161--2256
29
3.3
26
75
17
84
54
2
1
42
1.19
2159--2274
35
3.2
35
77
15
110
53
2
0
43
1.20
2159--2242
6
14.5
6
75
16
79
51
1
1
46
1.16
2190--2242
23
2.3
23
93
0
88
52
1
0
45
1.11
2159--2274
17
6.4
17
76
17
108
53
2
0
43
1.20
2159--2274
58
2.0
58
89
0
178
53
2
0
43
1.20
2177--2282
29
3.7
27
76
10
104
53
2
1
41
1.26
2190--2241
11
4.5
11
85
7
68
53
1
0
44
1.11
4212--4268
30
1.9
30
92
0
96
15
35
28
21
1.94
4614--4666
26
2.0
26
96
0
97
33
13
20
32
1.91
5454--5517
18
3.5
19
76
6
53
54
1
3
40
1.25
5465--5516
27
1.9
27
84
0
68
59
1
1
36
1.19
5465--5516
9
5.8
9
77
6
52
59
1
1
36
1.19
6724--6905
96
1.9
96
84
6
244
36
13
18
31
1.89
7261--7356
29
3.3
26
72
23
68
33
7
26
33
1.84
7161--7356
60
3.3
58
78
7
171
39
6
22
30
1.80
7312--7649
59
5.8
56
82
6
243
33
3
26
36
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7312--7658
30
11.8
30
77
8
329
33
3
27
36
1.73
7381--7662
59
4.8
59
86
6
333
32
3
27
36
1.73

Tables:   1

The End!