Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012943.1 Kokia drynarioides strain JFW-HI SEQ_127961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  110443

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
206--257
19
2.7
19
91
5
79
59
5
0
34
1.21
207--275
19
3.6
19
79
11
63
55
8
0
36
1.31
2281--2308
2
14.0
2
100
0
56
50
0
0
50
1.00
10146--10183
20
1.9
20
84
10
51
39
0
2
57
1.12
14500--14616
42
2.8
42
80
5
128
38
22
17
22
1.93
14527--14633
42
2.5
42
84
0
124
37
17
25
19
1.94
15345--15442
45
2.2
45
90
0
151
30
16
32
20
1.94
20009--20051
22
2.0
22
86
8
63
62
0
2
34
1.08
20467--20506
21
1.9
21
85
10
55
42
2
0
55
1.13
30940--31036
36
2.6
36
82
9
115
50
10
5
34
1.59
33129--33161
2
17.0
2
93
6
59
48
0
0
51
1.00
33128--33165
8
4.3
9
84
15
53
47
0
0
52
1.00
43530--43579
26
1.9
26
87
0
73
30
0
12
58
1.34
46058--46095
17
2.3
17
90
4
60
57
2
0
39
1.12
46854--46887
17
2.0
17
94
0
59
52
2
0
44
1.16
47277--47335
27
2.1
27
81
9
66
33
0
0
66
0.92
47276--47318
16
2.7
16
77
0
50
32
0
0
67
0.91
53819--53869
26
2.1
26
85
10
72
45
0
0
54
0.99
55426--55461
2
18.0
2
100
0
72
50
0
0
50
1.00
59240--59304
13
5.2
12
75
14
60
50
0
0
49
1.00
59242--59303
18
3.4
18
68
4
61
48
0
0
51
1.00
62686--62730
23
1.9
24
90
4
74
46
8
2
42
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63613--63672
29
2.0
32
83
9
81
43
3
5
48
1.41
64643--64670
1
28.0
1
100
0
56
0
0
0
100
0.00
64681--64707
1
27.0
1
100
0
54
0
0
0
100
0.00
65076--65117
20
2.1
20
82
8
50
40
4
4
50
1.45
72424--72457
17
2.0
17
94
0
59
26
5
0
67
1.13
75815--75862
11
4.5
10
79
10
51
50
0
2
47
1.12
75815--75862
21
2.2
22
85
3
62
50
0
2
47
1.12
78983--79038
25
2.2
25
96
3
103
37
12
3
46
1.59
79385--79426
20
2.1
20
100
0
84
28
19
14
38
1.90
79729--79764
2
18.0
2
100
0
72
0
50
0
50
1.00
83539--83615
39
2.0
39
97
2
147
27
15
12
44
1.83
89412--89578
91
1.9
88
87
8
250
47
10
16
25
1.79
94647--94801
78
2.0
78
93
0
265
46
17
14
21
1.84
95503--95538
2
18.0
2
100
0
72
50
0
0
50
1.00
101519--101553
2
17.5
2
100
0
70
51
48
0
0
1.00
102401--102465
29
2.2
29
86
0
85
26
9
10
53
1.65
102539--102576
18
2.0
20
85
10
53
36
18
10
34
1.85
102953--102983
14
2.2
14
94
0
53
51
0
0
48
1.00
103200--103771
214
2.7
214
94
0
993
38
11
10
39
1.76
109320--109421
46
2.2
46
92
0
168
30
10
28
30
1.91
109927--109952
4
6.5
4
100
0
52
26
0
23
50
1.50

Tables:   1

The End!