Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012945.1 Kokia drynarioides strain JFW-HI SEQ_127963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  156324

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--55
2
19.5
2
94
5
69
52
0
0
47
1.00
4342--4435
26
3.6
26
80
5
100
28
24
21
25
1.99
13673--13797
55
2.3
55
85
2
171
32
28
16
24
1.96
28162--28205
21
2.1
20
87
8
61
61
11
22
4
1.48
28947--28992
10
4.3
11
86
8
60
78
0
21
0
0.76
28954--28992
17
2.4
17
87
12
55
76
0
23
0
0.78
34140--34190
21
2.4
21
100
0
102
3
33
3
58
1.35
53398--53426
15
2.0
15
93
6
51
51
0
48
0
1.00
59849--59931
43
1.9
43
90
0
130
39
6
16
37
1.74
60730--60832
52
2.0
52
94
3
181
34
25
8
31
1.86
62742--62787
18
2.4
18
85
10
56
60
8
10
19
1.55
79440--79498
18
3.3
18
79
9
66
27
20
25
27
1.99
80226--80272
21
2.2
21
84
0
58
34
12
23
29
1.92
92060--92090
13
2.3
14
94
5
55
90
0
9
0
0.46
94625--94649
8
3.1
8
100
0
50
28
12
12
48
1.76
109885--109938
18
3.1
18
75
5
56
24
11
11
53
1.68
124437--124484
21
2.3
21
92
7
80
27
16
22
33
1.96
135507--135736
41
5.5
41
84
2
262
36
10
25
26
1.89
135507--135736
82
2.8
82
87
4
318
36
10
25
26
1.89
140638--140721
28
3.0
30
78
14
81
47
1
13
38
1.50
140851--140891
19
2.2
18
95
4
73
51
0
4
43
1.23
140857--140899
18
2.3
19
88
4
61
53
0
6
39
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141416--141491
24
3.2
23
75
15
75
64
0
0
35
0.94
141654--141722
15
4.4
15
75
20
52
65
2
0
31
1.08
141672--141741
31
2.3
31
80
5
79
65
1
0
32
1.01
141727--141787
12
5.3
12
69
23
51
50
3
1
44
1.28
141884--141936
27
2.0
27
81
7
63
58
1
1
37
1.20
141989--142031
12
3.6
12
87
12
54
53
2
0
44
1.13
143479--143537
20
2.8
21
80
12
68
27
5
1
66
1.22
143491--143536
20
2.3
20
92
0
74
26
6
2
65
1.28
143508--143569
33
1.9
32
90
3
97
32
4
1
61
1.27
143492--143580
20
4.8
20
70
16
66
29
7
4
58
1.46
143476--143577
53
1.9
54
85
2
143
28
6
2
61
1.36
143579--143646
34
1.9
34
88
5
100
33
7
4
54
1.48
143672--143751
25
3.4
25
69
13
87
37
7
1
53
1.37
143659--143769
46
2.4
46
96
1
204
34
8
2
54
1.44
144203--144250
24
2.0
24
95
0
87
12
10
31
45
1.76
144796--144882
39
2.2
38
80
6
102
26
4
3
65
1.28
145789--145899
57
1.9
57
87
0
159
38
17
18
26
1.92
145874--146043
58
3.0
58
74
10
163
38
11
19
30
1.87
146286--146331
22
2.1
21
84
4
56
28
2
4
65
1.23
150022--150084
32
2.0
31
81
9
74
36
7
19
36
1.81
151110--151147
20
1.9
19
89
5
58
55
5
5
34
1.45
152070--152438
29
12.5
30
76
14
315
31
5
30
32
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152070--152437
59
6.2
58
88
5
524
31
5
30
32
1.80
154277--154316
18
2.3
18
86
4
55
52
0
2
45
1.14
154295--154367
12
5.8
11
77
19
56
56
2
1
39
1.22
154277--154367
17
5.2
17
70
13
69
53
2
1
42
1.20
154277--154365
29
3.3
27
73
24
73
52
2
1
43
1.20
154737--155674
206
4.6
207
83
3
1128
21
22
20
36
1.96
154737--155673
411
2.3
411
89
1
1423
21
22
20
36
1.96

Tables:   1

The End!