Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012981.1 Kokia drynarioides strain JFW-HI SEQ_127999, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  145391

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
431--503
20
3.7
20
78
14
89
31
0
6
61
1.22
3666--3811
24
6.0
24
78
2
139
24
17
23
33
1.96
12386--12422
9
3.9
10
86
10
51
16
0
0
83
0.64
12383--12422
18
2.2
18
90
0
62
15
0
0
85
0.61
16129--16166
20
1.9
20
88
0
58
28
2
21
47
1.64
17855--17887
16
2.1
16
100
0
66
18
6
6
69
1.30
20192--20597
30
13.6
30
80
8
350
39
0
22
36
1.61
21603--21679
23
3.5
20
75
15
55
55
2
2
38
1.27
22904--22933
3
10.0
3
92
0
51
3
30
0
66
1.07
32611--32923
30
10.7
29
75
9
206
37
3
22
37
1.71
32585--32781
88
2.2
90
80
6
231
39
3
23
34
1.71
32585--32901
59
5.3
59
76
8
225
39
3
22
35
1.70
33272--33315
21
2.1
21
86
0
61
34
38
0
27
1.57
33623--33672
11
4.5
11
82
7
66
10
10
2
78
1.06
33623--33672
22
2.3
22
86
6
75
10
10
2
78
1.06
33947--33996
23
2.4
22
83
12
61
52
2
2
44
1.24
34546--34580
17
2.1
16
89
5
52
54
0
0
45
0.99
35189--35324
31
4.5
31
72
14
111
26
16
12
44
1.83
35189--35381
89
2.1
91
85
3
257
24
16
13
45
1.84
35556--35637
28
3.0
28
82
5
96
46
10
18
24
1.81
44172--44220
24
2.0
24
92
0
80
14
26
14
44
1.83
53890--53922
16
2.0
17
94
5
59
30
36
0
33
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54512--54679
85
2.0
85
93
0
291
27
14
15
42
1.86
61632--61841
49
4.3
48
80
2
195
34
17
20
26
1.95
70326--70365
18
2.3
17
91
4
62
62
0
27
10
1.27
72376--72452
37
2.1
37
97
0
145
38
22
16
22
1.93
77171--77316
76
1.9
76
95
0
265
40
13
8
37
1.75
77788--77839
21
2.5
21
71
20
54
48
13
0
38
1.43
83677--83737
30
2.0
31
90
3
97
37
11
16
34
1.85
84298--84340
16
2.6
16
81
7
50
46
0
0
53
1.00
93143--93190
20
2.4
20
76
13
53
70
6
8
14
1.31
95719--95761
18
2.5
17
85
7
59
41
0
6
51
1.29
95719--95792
19
4.1
18
83
10
80
36
1
6
55
1.35
105320--105365
23
2.0
23
100
0
92
43
8
34
13
1.74
123307--123342
18
2.0
18
89
10
56
69
0
5
25
1.10
124297--124334
20
1.9
20
100
0
76
55
15
13
15
1.70
124501--124576
23
3.3
23
81
3
82
34
18
21
26
1.96
126514--126658
73
2.0
73
100
0
290
35
8
19
36
1.82
131001--131064
19
3.0
23
73
17
82
35
15
7
40
1.76
132217--132270
28
1.9
28
100
0
108
14
12
3
68
1.34
135294--135341
22
2.2
22
92
0
78
50
22
2
25
1.60
135880--135913
5
6.8
5
100
0
68
20
58
0
20
1.39
136273--136431
79
2.0
79
98
0
309
13
37
9
39
1.78
145185--145246
26
2.5
25
76
7
63
38
4
1
54
1.31

Tables:   1

The End!