Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012987.1 Kokia drynarioides strain JFW-HI SEQ_128005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58744

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
344--380
14
2.7
14
88
12
51
51
16
2
29
1.58
1737--1778
4
10.2
4
80
14
50
0
30
2
66
1.04
1968--1999
11
2.6
13
80
19
50
9
6
15
68
1.36
1973--1999
11
2.5
11
100
0
54
7
7
14
70
1.32
2076--2100
10
2.5
10
100
0
50
84
0
0
16
0.63
6493--6517
3
8.3
3
100
0
50
32
32
0
36
1.58
8036--8094
29
2.0
29
87
9
84
37
13
3
45
1.60
8685--8714
13
2.4
13
94
5
53
53
3
0
43
1.17
11636--11718
31
2.7
31
85
10
100
22
26
25
25
2.00
12245--12269
5
5.0
5
100
0
50
0
40
0
60
0.97
15576--15608
16
2.1
16
100
0
66
30
6
27
36
1.81
19362--19427
33
2.0
33
100
0
132
30
9
24
36
1.86
22110--22194
42
2.0
42
100
0
170
28
4
27
40
1.76
24896--24922
11
2.5
11
100
0
54
70
0
14
14
1.17
24894--24926
11
2.7
13
81
18
52
72
0
12
15
1.12
25145--25235
4
22.2
4
78
8
94
70
0
27
2
0.99
25145--25198
21
2.6
21
96
0
99
74
0
25
0
0.83
25145--25226
25
3.3
24
81
8
94
70
0
28
1
0.95
28984--29051
14
4.9
14
83
13
79
25
0
22
52
1.47
28975--29051
28
2.8
28
88
2
93
23
1
23
51
1.55
29302--29430
45
2.9
45
84
0
168
19
20
26
33
1.97
31362--31410
16
3.2
16
75
16
59
34
0
6
59
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31890--31932
21
2.1
21
86
4
61
58
13
2
25
1.48
32090--32114
12
2.1
12
100
0
50
52
0
0
48
1.00
32298--32345
7
6.7
7
83
9
53
2
25
0
72
0.95
32301--32346
4
11.5
4
81
9
58
2
23
0
73
0.94
33740--33774
17
2.0
18
88
5
54
57
0
0
42
0.99
33747--33784
14
2.7
14
84
12
51
63
0
0
36
0.95
50617--50668
17
3.1
17
73
13
54
32
1
17
48
1.58
50743--50791
22
2.2
22
82
7
55
51
26
8
14
1.70
53354--53405
27
2.0
27
85
11
72
48
0
1
50
1.12
53620--53665
23
2.0
23
86
0
65
32
0
0
67
0.91
55061--55087
10
2.7
10
100
0
54
74
7
0
18
1.05
57987--58356
29
12.7
29
74
13
260
31
3
29
35
1.74
58104--58357
29
8.7
29
81
7
291
31
2
28
37
1.70
58104--58357
86
2.9
88
80
8
302
31
2
28
37
1.70
58016--58357
58
5.9
60
79
9
338
31
3
29
35
1.73

Tables:   1

The End!