Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012990.1 Kokia drynarioides strain JFW-HI SEQ_128008, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66795

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
495--558
16
3.7
16
69
18
56
12
17
31
39
1.87
511--617
21
5.6
21
67
20
90
11
19
31
37
1.87
491--616
37
3.4
37
91
0
198
11
18
30
38
1.87
1729--1756
7
4.0
7
100
0
56
0
14
0
85
0.59
5893--6022
28
4.5
30
75
12
110
36
8
23
31
1.85
5899--6241
29
11.7
29
70
13
152
34
5
24
35
1.79
5860--6170
29
10.6
29
72
12
183
34
5
24
35
1.79
5860--6241
58
6.5
59
75
11
277
34
5
25
35
1.78
6144--6235
28
3.1
30
81
10
109
36
1
27
34
1.64
7983--8062
6
13.8
6
75
7
76
53
2
1
42
1.22
7983--8062
11
6.9
12
77
7
76
53
2
1
42
1.22
7988--8062
17
4.4
17
84
1
105
54
2
1
41
1.23
7990--8051
23
2.7
23
85
5
81
54
3
1
40
1.26
20497--20531
12
2.9
12
100
0
70
25
8
14
51
1.70
20580--20690
28
4.0
28
75
4
91
33
17
18
31
1.93
34259--34349
37
2.4
37
83
1
110
27
36
16
19
1.93
41536--41585
20
2.5
20
77
6
57
72
0
0
28
0.86
41541--41596
28
2.1
26
80
12
60
64
0
1
33
1.04
41757--41799
7
5.7
7
84
10
50
67
0
0
32
0.91
41821--41900
32
2.5
33
80
12
94
63
1
0
35
1.02
41863--41897
8
4.4
8
89
10
54
57
0
0
42
0.99
41751--41799
8
6.2
8
83
7
57
67
0
2
30
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42052--42093
12
3.5
12
83
0
57
61
30
0
7
1.22
48070--48110
17
2.4
17
87
0
55
21
2
0
75
0.92
48218--48293
17
4.5
17
79
11
77
30
6
9
53
1.58
54763--54846
9
10.2
8
70
26
52
78
2
17
0
0.85
54761--54851
40
2.3
40
92
5
157
78
2
18
0
0.85
54761--54853
41
2.3
41
92
3
163
77
2
19
0
0.86
54793--54840
24
1.9
25
87
8
71
79
2
16
0
0.81
54819--54852
15
2.1
16
89
10
52
85
0
14
0
0.60
54779--54857
14
5.8
14
71
10
56
78
1
18
0
0.81
55695--56281
50
11.5
52
68
8
184
34
17
20
28
1.95
55691--56284
102
5.8
102
84
3
723
34
17
20
28
1.95
55688--56284
204
2.9
203
85
4
801
34
17
20
28
1.95
55690--56284
305
1.9
306
86
4
835
34
17
20
28
1.95
64784--65044
101
2.6
101
80
3
294
37
20
16
25
1.93

Tables:   1

The End!