Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012996.1 Kokia drynarioides strain JFW-HI SEQ_128014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  144510

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--933
16
2.2
18
90
9
60
40
2
5
51
1.39
5134--5201
33
2.1
33
97
0
127
22
10
30
36
1.87
7390--7442
27
2.0
27
85
7
72
26
30
26
16
1.97
10780--10837
28
2.1
28
83
6
73
32
1
15
50
1.55
10829--10878
26
1.9
26
87
0
73
30
0
12
58
1.34
13814--13874
2
30.5
2
100
0
122
49
0
0
50
1.00
20816--20850
3
11.7
3
100
0
70
34
0
0
65
0.93
21933--21971
20
2.0
20
85
10
53
23
5
2
69
1.21
22474--22513
2
20.0
2
94
0
71
47
0
0
52
1.00
23413--23454
15
2.7
15
82
17
59
30
0
2
66
1.04
29073--29133
22
2.8
21
78
11
61
34
26
1
37
1.66
29096--29140
22
2.0
22
91
0
72
35
22
2
40
1.66
29800--29827
2
14.0
2
100
0
56
50
0
0
50
1.00
41727--41815
43
2.1
43
100
0
178
33
8
22
34
1.86
44672--45230
183
3.0
181
86
6
675
26
22
17
33
1.96
48554--48597
19
2.3
19
84
7
54
13
2
6
77
1.07
62279--62323
22
2.0
22
83
8
56
33
2
4
60
1.29
72909--72941
2
16.5
2
100
0
66
51
0
48
0
1.00
78324--78348
13
1.9
13
100
0
50
0
8
0
92
0.40
81997--82047
15
3.3
15
71
15
50
29
15
5
49
1.68
89845--89901
19
2.9
19
77
15
62
64
0
0
35
0.93
91971--92110
69
2.0
67
86
10
194
12
20
21
45
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91938--92110
23
7.4
23
77
13
140
12
22
20
44
1.85
92805--92842
12
3.2
12
85
10
51
13
2
2
81
0.90
111197--111267
20
3.6
19
71
19
56
47
1
0
50
1.09
111271--111314
23
1.9
23
86
9
63
43
2
9
45
1.48
115453--115521
21
3.5
21
64
16
58
33
15
18
31
1.93
115455--115529
38
2.0
38
94
0
132
34
16
16
33
1.90
118266--118309
23
1.9
23
86
9
63
45
0
9
45
1.35
120463--120533
24
3.0
24
91
0
115
30
42
21
5
1.76
129908--129995
43
2.0
43
91
0
140
54
14
6
23
1.64
129961--130153
96
2.0
96
100
0
386
39
21
8
30
1.83
144031--144067
18
2.0
18
89
5
56
18
0
0
81
0.70
144438--144474
9
4.3
9
83
10
51
54
0
45
0
1.00

Tables:   1

The End!