Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013000.1 Kokia drynarioides strain JFW-HI SEQ_128018, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58134

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5215--5260
20
2.2
21
92
3
76
17
21
21
39
1.93
6121--6154
16
2.1
16
100
0
68
32
5
17
44
1.73
6268--6308
3
13.7
3
100
0
82
31
0
0
68
0.90
22425--22458
16
2.1
16
88
0
50
58
0
20
20
1.39
24350--24663
42
7.4
43
83
10
201
36
9
24
29
1.86
24437--24685
42
6.0
42
87
1
322
36
9
23
30
1.86
35989--36043
17
3.2
17
78
0
65
20
20
12
47
1.82
35995--36049
17
3.2
17
75
10
58
20
20
12
47
1.82
36596--36654
30
2.0
30
93
0
100
40
15
5
38
1.69
39178--39218
12
3.1
14
76
16
52
70
7
7
14
1.31
39209--39251
19
2.3
19
84
8
52
58
4
0
37
1.19
40588--40642
28
2.0
28
89
7
85
20
0
5
74
1.01
43379--43523
72
2.1
72
83
8
183
35
15
6
43
1.71
43607--43679
35
2.1
35
86
0
101
31
10
6
50
1.64
45740--45846
53
2.0
53
81
15
123
59
4
14
21
1.52
45772--45846
26
2.8
27
76
7
73
58
4
14
22
1.53
45764--45844
12
6.2
12
71
14
54
61
2
14
20
1.44
45976--46014
20
2.1
19
86
13
55
51
5
5
38
1.46

Tables:   1

The End!