Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013006.1 Kokia drynarioides strain JFW-HI SEQ_128024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49400

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
319--484
29
5.6
29
75
5
118
35
32
3
28
1.75
354--581
30
7.7
30
75
9
202
34
32
3
30
1.75
323--582
59
4.4
60
83
5
298
35
31
3
30
1.74
11479--11570
44
2.1
44
85
0
121
44
15
27
13
1.83
12495--13097
206
2.9
206
86
0
859
35
18
23
22
1.95
12979--13169
86
2.2
86
83
1
231
35
16
22
26
1.95
12773--13379
292
2.1
292
96
0
1106
36
17
22
23
1.95
13769--13854
11
7.4
12
71
20
58
44
2
2
51
1.27
13769--13854
6
14.8
6
70
18
58
44
2
2
51
1.27
13769--13839
35
2.0
35
86
8
99
40
1
2
54
1.23
14595--14629
13
2.7
13
86
0
52
54
0
0
45
0.99
15636--16063
30
14.7
29
73
12
249
35
30
2
31
1.70
15701--15794
49
1.9
49
86
4
136
37
31
1
29
1.65
15730--15782
20
2.6
20
82
11
63
37
32
1
28
1.68
15763--16068
60
5.1
59
80
5
289
36
29
1
32
1.67
15763--16004
89
2.7
89
87
1
351
35
29
0
33
1.64
17979--18025
20
2.3
21
82
7
62
34
0
2
63
1.06
17968--18048
33
2.6
30
74
18
76
41
0
2
55
1.13
18032--18080
19
2.7
18
84
9
55
38
0
4
57
1.18
18018--18081
19
3.2
20
72
14
53
40
0
3
56
1.15
18987--19072
11
7.4
12
71
20
58
44
2
2
51
1.27
18987--19072
6
14.8
6
70
18
58
44
2
2
51
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18987--19057
35
2.0
35
86
8
99
40
1
2
54
1.23
19813--19847
13
2.7
13
86
0
52
54
0
0
45
0.99
20854--21281
30
14.7
29
73
12
249
35
30
2
31
1.70
20919--21012
49
1.9
49
86
4
136
37
31
1
29
1.65
20948--21000
20
2.6
20
82
11
63
37
32
1
28
1.68
20981--21286
60
5.1
59
80
5
289
36
29
1
32
1.67
20981--21222
89
2.7
89
87
1
351
35
29
0
33
1.64
23197--23243
20
2.3
21
82
7
62
34
0
2
63
1.06
23186--23266
33
2.6
30
74
18
76
41
0
2
55
1.13
23250--23298
19
2.7
18
84
9
55
38
0
4
57
1.18
23236--23299
19
3.2
20
72
14
53
40
0
3
56
1.15
23759--23817
31
1.9
31
85
0
82
33
11
0
54
1.37
31545--31626
17
4.8
17
82
5
103
41
1
3
53
1.26
31544--31626
34
2.4
34
86
4
114
42
1
3
53
1.26
33356--33744
29
13.2
29
85
5
476
35
29
1
33
1.66
33356--33744
59
6.6
58
84
4
485
35
29
1
33
1.66
33356--33744
88
4.4
87
85
4
469
35
29
1
33
1.66
33356--33821
88
5.3
86
83
5
438
35
29
1
33
1.67
45348--45431
6
14.7
6
68
26
58
44
1
3
51
1.26
45348--45429
17
4.8
17
83
5
112
42
1
3
52
1.26
45395--45443
24
2.1
24
85
11
66
46
2
2
48
1.25
47084--47400
29
10.7
29
81
11
333
33
28
3
35
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47083--47400
59
5.4
59
86
3
424
33
27
3
34
1.73

Tables:   1

The End!