Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001301.1 Kokia drynarioides strain JFW-HI SEQ_112707, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109001

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4709--4739
13
2.4
13
100
0
62
0
6
6
87
0.68
7327--7380
21
2.6
21
74
11
65
24
18
11
46
1.81
11701--11973
130
2.1
130
98
0
528
42
6
3
46
1.48
15170--15222
17
2.8
18
76
15
54
54
7
1
35
1.40
23606--23661
22
2.5
22
94
2
94
42
1
0
55
1.10
23626--23695
8
8.6
8
71
13
54
40
2
1
55
1.23
24517--24547
2
15.5
2
100
0
62
48
0
0
51
1.00
25442--25473
5
6.2
5
92
7
55
0
21
0
78
0.76
26518--26599
21
3.9
21
77
0
92
30
20
20
28
1.98
26518--26599
42
2.0
42
87
0
119
30
20
20
28
1.98
30355--30406
26
2.1
24
85
7
68
69
11
7
11
1.37
30559--30609
26
1.9
27
84
4
68
58
13
3
23
1.52
32302--32332
3
10.3
3
92
0
53
3
29
0
67
1.06
32962--33005
3
14.7
3
100
0
88
34
0
34
31
1.58
38515--38553
20
2.0
20
94
0
69
41
25
17
15
1.89
38547--38592
18
2.6
18
85
0
65
26
21
28
23
1.99
38556--38609
25
2.2
25
86
0
72
25
18
29
25
1.98
38625--38649
6
4.2
6
100
0
50
0
0
52
48
1.00
38669--38731
23
2.8
23
86
9
78
25
0
28
46
1.53
38689--38747
24
2.5
22
81
10
64
23
0
30
45
1.53
41793--41841
18
2.7
18
78
12
55
34
26
20
18
1.95
41895--41942
22
2.2
21
85
10
62
27
0
25
47
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43994--44022
3
9.7
3
100
0
58
65
0
34
0
0.93
44021--44082
3
20.7
3
93
0
106
33
0
37
29
1.58
44446--44502
29
2.0
29
86
6
80
28
0
5
66
1.13
44497--44526
16
1.9
15
93
6
51
30
0
10
60
1.30
45624--45664
21
2.0
21
95
0
73
58
7
0
34
1.26
49904--50023
60
2.0
60
100
0
240
33
16
21
28
1.95
58310--58374
21
3.1
21
100
0
130
38
0
4
56
1.20
59178--59228
25
2.0
25
92
0
84
39
21
11
27
1.88
61951--62025
31
2.4
30
93
6
132
54
13
12
20
1.70
62036--62099
31
2.0
32
85
8
87
46
12
12
28
1.78
75851--75891
20
2.0
20
85
0
55
58
0
4
36
1.20
75884--75940
29
2.0
29
85
0
78
50
3
1
43
1.29
76225--76293
31
2.2
32
82
10
90
47
18
10
23
1.79
76864--76909
18
2.4
19
82
7
58
2
23
0
73
0.94
76864--76920
21
2.6
22
76
15
64
1
24
0
73
0.92
90072--90122
25
2.0
26
92
3
86
41
19
13
25
1.88
93950--94101
77
2.0
77
98
0
295
48
13
7
31
1.69
95014--95077
21
3.0
21
73
13
67
37
18
15
28
1.92
94989--95077
43
2.1
42
85
6
117
41
17
15
24
1.89
98273--98308
17
2.1
17
94
0
63
2
2
5
88
0.67
101203--101344
55
2.6
54
81
8
144
19
26
26
28
1.99
104933--105041
46
2.3
46
82
1
119
33
25
12
27
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105934--106104
91
1.9
90
83
8
222
32
7
21
39
1.81
106883--106909
9
3.0
9
100
0
54
55
0
0
44
0.99
106876--106932
13
4.5
13
78
20
50
50
0
0
49
1.00
106946--106982
16
2.3
17
81
13
51
59
0
2
37
1.12
107015--107071
15
3.5
15
71
17
51
49
1
1
47
1.22

Tables:   1

The End!