Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013011.1 Kokia drynarioides strain JFW-HI SEQ_128029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  152232

Tables:   1   

This is table  1  of  1  ( 70 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5075--5147
33
2.2
33
82
4
85
24
8
16
50
1.72
5258--5305
19
2.8
16
79
14
51
35
6
4
54
1.45
5234--5307
21
3.5
21
74
12
62
33
5
4
56
1.41
8509--8611
9
11.6
9
67
15
54
66
2
3
26
1.22
8565--8611
18
2.6
18
86
10
60
70
2
4
23
1.16
12711--12827
12
10.2
12
72
9
91
70
14
3
11
1.30
12686--12807
44
2.8
43
83
5
138
68
16
4
11
1.35
12727--12842
9
12.6
9
67
18
51
70
12
3
12
1.28
12718--12806
23
4.0
23
75
10
85
69
15
4
10
1.32
12686--12759
20
3.5
20
74
16
69
66
17
4
12
1.39
12719--12848
24
5.6
24
77
9
110
70
13
3
13
1.31
12750--12848
12
8.3
12
74
5
94
70
12
3
14
1.27
12785--12859
23
3.2
23
75
5
71
72
12
2
13
1.24
12844--12930
21
4.3
19
74
12
66
68
16
6
8
1.35
12853--12930
21
3.8
20
75
11
68
70
15
6
7
1.31
12844--12930
41
2.1
41
78
0
93
68
16
6
8
1.35
15061--15105
23
2.0
23
95
0
81
15
28
13
42
1.85
15805--15846
17
2.4
18
80
15
52
47
14
2
35
1.57
22492--22536
23
2.0
23
95
0
81
53
17
11
17
1.72
24950--25024
20
3.8
20
72
10
66
33
10
1
54
1.43
37562--37603
17
2.3
19
84
12
61
38
0
0
61
0.96
37563--37609
17
2.8
16
78
9
58
40
0
0
59
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38312--38383
31
2.5
31
74
17
75
50
0
0
50
1.00
38595--38624
3
10.0
3
100
0
60
33
0
0
66
0.92
38598--38682
18
4.8
18
68
21
54
36
3
2
57
1.29
39892--39950
27
2.1
28
84
3
75
44
6
1
47
1.39
40609--40634
13
2.0
13
100
0
52
92
0
7
0
0.39
42922--42966
22
2.0
22
82
4
54
64
2
2
31
1.18
43405--43493
34
2.5
36
85
5
110
17
11
22
48
1.79
51437--51468
4
8.0
4
100
0
64
50
25
25
0
1.50
54744--54784
1
41.0
1
90
0
55
4
0
0
92
0.31
54736--54783
24
2.0
24
83
0
60
12
4
0
81
0.81
54958--55005
11
4.4
11
75
0
51
14
2
12
70
1.25
54956--55013
22
2.6
22
77
0
62
15
1
13
68
1.28
54956--55008
19
2.8
20
80
11
67
15
1
13
69
1.27
56250--56275
3
8.7
3
100
0
52
0
34
0
65
0.93
64353--64410
27
2.1
27
84
6
73
34
13
24
27
1.93
67075--67136
27
2.3
27
80
0
79
25
38
17
17
1.92
67625--67662
6
6.3
6
90
0
58
18
13
21
47
1.82
71500--71615
59
2.0
58
83
6
144
57
14
4
23
1.55
74492--74865
113
3.5
103
77
9
358
34
12
23
28
1.92
79079--79108
10
3.0
10
100
0
60
40
40
0
20
1.52
81298--81324
2
13.5
2
100
0
54
51
0
48
0
1.00
81912--82022
30
3.7
30
95
0
195
40
9
20
29
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86154--86191
19
2.1
19
85
5
51
55
0
0
44
0.99
86416--86491
39
2.0
38
86
2
107
28
2
3
64
1.25
86433--86512
19
4.2
19
71
7
65
33
1
2
62
1.16
86632--86794
87
1.9
85
86
7
231
40
7
13
38
1.74
87293--87333
22
1.9
22
90
5
66
58
0
7
34
1.26
87293--87339
22
2.1
22
84
7
60
61
2
6
29
1.32
87699--87779
40
2.0
40
81
9
94
55
0
3
40
1.17
89949--90049
50
2.0
50
98
0
193
36
21
17
23
1.95
94902--94949
18
2.8
17
81
6
51
39
6
0
54
1.26
99266--99359
47
2.0
47
95
0
170
30
20
30
18
1.96
106679--106742
28
2.3
28
97
0
119
54
3
0
42
1.16
114262--114297
12
3.0
12
87
0
54
47
30
2
19
1.64
116061--116109
14
3.2
15
86
11
64
71
16
0
12
1.14
116062--116141
6
12.8
6
71
20
58
66
18
0
15
1.26
116069--116149
21
3.9
21
75
15
60
65
19
0
14
1.27
116081--116141
17
3.4
17
80
17
70
63
18
0
18
1.30
131772--131826
21
2.6
21
82
0
56
34
10
16
38
1.84
141637--141680
17
2.6
17
81
0
52
45
15
4
34
1.67
141707--141764
16
3.6
16
84
15
75
44
22
5
27
1.74
141914--141947
12
2.8
12
90
4
50
8
2
17
70
1.25
142592--142670
33
2.4
33
86
0
104
27
0
45
26
1.54
142678--142745
33
2.1
33
82
0
82
26
4
47
22
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
146194--146276
24
3.5
24
91
0
139
28
25
24
21
1.99
149640--149670
15
2.1
15
93
0
53
32
6
19
41
1.77
150262--150537
137
2.0
136
97
1
525
26
13
9
50
1.71
150278--150490
71
3.1
71
64
19
185
25
13
9
50
1.72

Tables:   1

The End!