Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013012.1 Kokia drynarioides strain JFW-HI SEQ_128030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96470

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2370--2500
44
3.0
44
96
0
235
45
12
11
29
1.78
2765--2800
13
2.6
14
86
8
56
41
13
0
44
1.44
2778--2837
27
2.3
25
85
5
75
36
20
3
40
1.69
2794--2837
13
3.5
12
84
9
61
38
22
4
34
1.75
2789--2844
25
2.1
27
90
6
89
33
21
5
39
1.76
2794--2843
13
4.0
12
82
7
55
36
22
6
36
1.79
11420--11509
43
2.1
43
85
0
117
32
5
18
43
1.74
14562--14600
12
3.2
12
81
0
51
41
20
5
33
1.74
29769--29855
23
3.8
23
83
3
95
37
18
14
28
1.91
31960--31990
16
1.9
16
100
0
62
35
19
25
19
1.95
34456--34554
3
33.0
3
75
4
83
37
4
29
29
1.76
40224--40294
20
3.6
19
80
3
61
36
12
5
45
1.66
40352--40389
20
1.9
20
88
0
58
50
2
21
26
1.62
40350--40398
20
2.4
20
79
3
53
44
8
18
28
1.78
41169--41230
25
2.7
22
73
11
61
48
0
1
50
1.10
41823--41883
30
2.1
30
78
6
72
55
4
1
37
1.31
43917--43944
3
9.3
3
100
0
56
67
0
32
0
0.91
45516--45554
18
2.2
17
86
4
51
69
0
0
30
0.89
45512--45563
17
2.8
18
78
18
54
67
1
0
30
1.02
48996--49046
16
3.1
16
85
2
57
54
1
0
43
1.11
65145--65190
24
1.9
24
86
8
67
56
2
2
39
1.24
65155--65190
17
2.2
16
90
5
54
58
2
0
38
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65390--65499
57
1.9
58
84
12
149
58
3
1
36
1.26
65494--65539
16
3.1
15
84
9
58
56
0
4
39
1.19
65494--65533
16
2.5
16
87
0
62
55
0
5
40
1.22
67097--67266
57
2.9
59
78
4
191
25
14
9
51
1.72
67434--67494
24
2.5
24
78
19
65
24
1
4
68
1.18
69536--69743
103
2.0
103
92
0
344
26
18
15
38
1.91
70694--70726
6
5.3
6
92
7
57
48
0
0
51
1.00
82190--82220
2
15.5
2
100
0
62
48
0
51
0
1.00
84608--84716
41
2.6
42
80
12
127
44
13
17
24
1.85
84621--84718
41
2.4
41
86
3
135
43
13
16
26
1.84
88743--88780
20
1.9
20
88
0
58
60
7
2
28
1.38

Tables:   1

The End!