Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013013.1 Kokia drynarioides strain JFW-HI SEQ_128031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99654

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5470--5509
19
2.0
20
90
4
64
47
7
0
45
1.31
12455--12494
19
2.0
20
90
4
64
47
7
0
45
1.31
26746--26785
21
1.9
22
90
10
66
70
17
2
10
1.27
33351--33403
20
2.7
20
82
2
72
33
0
9
56
1.32
35212--35278
30
2.2
31
86
7
93
49
16
13
20
1.79
41612--41654
2
21.5
2
100
0
86
51
0
48
0
1.00
41734--41774
21
1.9
21
90
5
64
41
4
2
51
1.36
42283--42373
32
2.9
31
91
3
148
39
9
7
42
1.67
42282--42386
32
3.4
30
85
7
140
40
9
6
43
1.63
48214--48248
4
8.2
4
87
12
52
71
0
0
28
0.86
48213--48248
13
2.8
13
91
8
56
69
0
0
30
0.89
48214--48248
17
2.1
17
100
0
70
71
0
0
28
0.86
49172--49236
31
2.1
32
85
8
89
27
12
9
50
1.70
53242--53273
2
16.0
2
100
0
64
50
50
0
0
1.00
56900--56941
22
1.9
22
90
0
66
33
0
2
64
1.07
59033--59109
34
2.2
34
78
21
81
61
1
6
31
1.30
74123--74174
21
2.4
22
83
3
61
1
13
1
82
0.84
74142--74181
19
2.2
19
86
8
57
0
20
0
80
0.72
74473--74534
27
2.3
28
80
8
74
54
0
3
41
1.16
85292--85337
23
2.0
23
83
8
58
45
0
2
52
1.13
86398--86484
31
2.9
31
84
3
115
42
14
8
34
1.76
87294--87345
26
2.0
27
88
3
79
48
3
1
46
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88802--88833
2
16.0
2
100
0
64
0
50
0
50
1.00
99585--99637
4
12.8
4
84
7
61
66
0
33
0
0.92
99585--99617
17
1.9
17
100
0
66
69
0
30
0
0.88
99584--99650
20
3.2
20
83
10
82
62
0
37
0
0.95

Tables:   1

The End!