Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013029.1 Kokia drynarioides strain JFW-HI SEQ_128047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29596

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3071--3104
14
2.4
14
95
0
59
76
2
0
20
0.92
3101--3158
18
3.2
18
73
9
55
70
3
6
18
1.24
3774--3812
14
2.7
15
80
8
53
56
10
7
25
1.59
9135--9170
16
2.2
17
85
14
58
41
0
5
52
1.24
11556--11707
82
1.9
82
84
0
205
31
13
18
36
1.89
12159--12333
96
1.8
96
93
0
305
50
13
9
27
1.71
12159--12333
48
3.6
48
88
0
260
50
13
9
27
1.71
15244--15313
29
2.4
28
81
11
79
25
12
8
52
1.67
15322--15407
40
2.2
39
80
4
91
20
15
11
52
1.73
15485--15547
28
2.2
28
85
0
81
30
14
6
49
1.68
15988--16059
31
2.3
32
75
2
74
36
8
16
38
1.79
16506--16635
56
2.3
57
86
2
192
23
17
12
46
1.81
16491--16629
29
4.9
28
76
4
145
23
17
10
48
1.78
16491--16635
28
5.1
28
72
4
121
22
16
11
48
1.78
16496--16676
85
2.1
85
79
4
186
24
18
10
46
1.80
16558--16718
28
5.7
29
76
7
98
22
18
9
48
1.78
18814--18891
40
2.0
40
94
0
138
38
21
8
30
1.84
21695--21779
22
3.9
22
87
0
116
36
11
15
36
1.84
25431--25478
13
3.8
12
86
8
60
10
14
2
72
1.19
25425--25485
25
2.6
22
78
16
68
8
13
1
77
1.07
25419--25485
12
5.6
12
72
11
50
8
11
1
77
1.05
26404--26456
5
9.8
5
80
15
61
73
0
3
22
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26404--26455
27
1.9
27
88
7
79
73
0
3
23
1.00
26327--26638
155
2.0
154
99
0
615
60
6
9
23
1.50
26559--26611
5
9.8
5
80
15
61
73
0
3
22
0.99
26559--26610
27
1.9
27
88
7
79
73
0
3
23
1.00

Tables:   1

The End!