Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013033.1 Kokia drynarioides strain JFW-HI SEQ_128051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111889

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
436--500
26
2.4
25
80
10
58
36
3
0
60
1.13
1238--1317
31
2.5
33
91
6
128
43
0
35
21
1.53
1315--1369
17
3.4
17
76
19
71
47
0
32
20
1.50
1374--1450
27
2.9
26
77
9
84
48
1
0
50
1.09
9865--9947
31
2.6
33
73
11
82
51
7
1
39
1.37
9887--9987
31
3.3
30
75
4
87
44
10
3
40
1.58
15433--15497
19
3.5
17
80
14
67
21
4
7
66
1.36
15594--15640
25
2.0
25
87
8
71
63
0
8
27
1.23
16221--16264
3
14.7
3
100
0
88
68
0
0
31
0.90
26612--26780
83
2.0
83
97
0
320
36
17
14
31
1.91
28147--28189
2
21.5
2
100
0
86
51
0
0
48
1.00
35210--35259
15
3.4
15
78
13
59
36
0
0
64
0.94
35186--35272
30
3.0
29
75
17
81
37
0
0
62
0.96
39620--39666
18
2.5
19
83
13
62
44
4
8
42
1.54
47883--48009
62
2.0
62
93
0
218
29
18
10
42
1.83
58545--58586
21
2.0
22
90
4
68
57
9
9
23
1.60
62446--62872
41
10.4
41
80
1
406
30
16
28
24
1.97
63411--63447
19
2.0
18
89
5
56
35
0
8
56
1.29
64870--65001
43
3.1
43
84
2
160
38
18
23
19
1.93
68573--68718
23
6.3
23
84
6
129
12
23
21
42
1.87
68573--68719
46
3.2
46
81
10
149
12
23
21
42
1.86
68573--68745
48
3.7
43
75
14
141
12
24
20
42
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70039--70115
14
5.5
13
73
23
59
45
2
2
49
1.29
70040--70122
22
3.8
22
77
6
87
44
2
2
50
1.28
70039--70123
44
1.9
44
95
0
152
44
2
2
50
1.27
70088--70319
56
4.2
56
85
6
298
46
6
3
43
1.44
70218--70295
8
9.5
8
70
10
50
39
3
3
52
1.38
74870--74904
9
3.9
9
88
0
52
25
2
17
54
1.57
75043--75067
13
1.9
13
100
0
50
40
8
16
36
1.77
75095--75131
17
2.2
17
90
4
58
62
0
5
32
1.18
77718--77772
27
2.1
27
90
9
89
36
40
9
14
1.78
80012--80041
15
2.0
15
100
0
60
86
0
13
0
0.57
80012--80041
7
4.1
7
91
8
51
86
0
13
0
0.57
83867--83908
23
1.9
22
85
9
59
45
7
2
45
1.44
85420--85453
17
2.0
17
94
0
59
26
11
29
32
1.92
85574--85618
18
2.5
18
81
0
63
31
0
0
68
0.89
85585--85636
26
2.0
27
88
11
81
38
0
0
61
0.96
105841--105878
20
1.9
20
94
0
67
52
0
2
44
1.14
106293--106333
19
2.2
19
91
4
66
65
2
2
29
1.18
110704--110895
96
2.0
96
83
6
246
36
13
20
29
1.91
111161--111618
59
7.8
59
85
5
534
32
3
31
33
1.75
111160--111618
29
15.7
29
73
10
346
32
3
31
33
1.75

Tables:   1

The End!