Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013035.1 Kokia drynarioides strain JFW-HI SEQ_128053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98742

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
391--443
20
2.6
21
80
14
67
35
3
1
58
1.27
2563--2587
3
8.3
3
100
0
50
68
0
32
0
0.90
6141--6198
27
2.2
26
78
3
62
51
1
0
46
1.11
6208--6348
58
2.4
58
84
2
176
44
1
2
51
1.22
20466--20505
21
2.0
21
90
5
64
7
0
7
85
0.76
24985--25029
22
2.1
21
87
4
63
33
22
6
37
1.80
26213--26241
5
5.8
5
100
0
58
82
0
17
0
0.66
26699--26742
22
2.0
22
81
0
52
43
4
0
52
1.22
26922--26952
2
15.5
2
100
0
62
48
0
0
51
1.00
28075--28166
40
2.3
40
80
1
103
41
17
18
22
1.90
28329--28382
26
2.1
26
89
0
81
55
7
3
33
1.45
28571--28601
14
2.3
13
94
5
53
0
16
0
83
0.64
29932--30104
23
7.5
22
80
12
138
43
23
22
10
1.85
30547--30596
26
1.9
26
100
0
100
34
22
4
40
1.72
33786--33925
43
3.3
43
79
7
151
30
19
25
25
1.98
33792--33925
42
3.1
42
79
10
121
29
20
25
24
1.99
35305--35469
82
2.0
82
98
0
321
27
24
13
33
1.94
37656--37807
78
2.0
76
81
6
180
29
36
11
22
1.90
38722--38784
29
2.2
29
88
5
92
65
1
1
31
1.12
39400--39518
60
2.0
60
96
0
220
36
18
21
22
1.95
39521--39591
29
2.4
29
83
4
79
50
15
14
19
1.77
44597--44651
21
2.6
22
80
5
60
21
9
7
61
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44597--44655
22
2.7
23
77
12
63
20
8
8
62
1.49
46503--46539
6
6.3
6
93
3
58
2
45
0
51
1.15
48750--48816
33
2.0
33
100
0
134
38
17
11
31
1.87
54353--54394
20
2.1
20
82
8
50
35
2
9
52
1.47
57108--57133
4
6.5
4
100
0
52
23
0
26
50
1.50
59123--59148
2
13.0
2
100
0
52
50
0
0
50
1.00
61510--61541
16
1.9
17
93
6
57
56
0
0
43
0.99
80400--80429
6
5.0
6
95
0
51
36
33
16
13
1.88

Tables:   1

The End!