Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013040.1 Kokia drynarioides strain JFW-HI SEQ_128058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36922

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1003--1074
20
3.6
19
76
9
81
44
8
1
45
1.42
1382--1434
20
2.7
20
79
5
63
47
7
5
39
1.56
1406--1461
28
2.0
27
86
10
78
44
7
7
41
1.59
1433--1511
19
4.0
20
73
14
74
44
8
10
36
1.70
1971--2036
30
2.2
31
88
2
98
63
13
0
22
1.29
1965--2041
30
2.4
33
76
17
88
63
14
0
22
1.30
3000--3111
20
5.6
20
70
15
61
33
5
14
46
1.67
3151--3215
20
3.2
20
80
6
87
41
7
15
35
1.76
3151--3273
20
6.1
19
73
9
66
35
6
16
41
1.74
5437--5473
14
2.6
14
82
0
56
45
0
8
45
1.32
7101--7160
24
2.5
24
91
0
102
23
20
30
26
1.98
24355--24417
24
2.6
24
76
14
58
20
6
49
23
1.72
27160--27222
21
2.8
23
77
15
69
55
19
1
23
1.51
27160--27533
9
40.9
9
68
23
144
55
18
3
21
1.58
27143--27260
49
2.3
49
81
11
132
57
19
1
21
1.49
27187--27533
5
70.2
5
65
26
106
55
18
4
21
1.59
27278--27405
44
3.0
42
76
11
141
56
19
3
20
1.58
27137--27428
162
1.8
157
91
3
485
56
19
3
21
1.56
27637--27696
31
2.0
30
96
3
104
61
16
10
10
1.53
27684--27743
28
2.2
28
90
3
95
63
3
10
23
1.40
27883--27938
29
1.9
29
92
0
94
62
8
12
16
1.53
29966--30015
25
2.0
25
96
0
91
52
2
26
20
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33338--33383
24
1.9
24
91
8
76
19
34
28
17
1.94

Tables:   1

The End!