Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013060.1 Kokia drynarioides strain JFW-HI SEQ_128078, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84446

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3068--3114
15
3.2
15
75
6
60
61
8
0
29
1.25
5914--5958
19
2.4
19
96
0
81
33
11
20
35
1.88
15166--15761
142
4.2
142
94
0
1012
31
16
23
29
1.96
18227--18448
112
2.0
112
97
0
417
30
12
12
44
1.79
36458--36501
21
2.1
21
91
0
70
40
11
20
27
1.86
37645--37686
16
2.6
16
82
10
50
54
2
0
42
1.13
43618--43661
20
2.3
19
81
14
54
31
4
4
59
1.38
46155--46189
2
17.5
2
100
0
70
48
0
0
51
1.00
46290--46326
3
13.0
3
88
11
60
35
0
0
64
0.94
46290--46326
8
4.3
9
96
3
60
35
0
0
64
0.94
49689--49721
2
16.5
2
100
0
66
48
0
0
51
1.00
49732--49793
24
2.7
23
76
11
65
67
1
3
27
1.15
50296--50331
2
18.0
2
88
0
54
44
50
5
0
1.25
55074--55109
13
2.6
14
86
8
56
44
0
8
47
1.33
57263--57306
21
2.2
20
83
4
52
18
6
20
54
1.66
57863--58012
30
5.1
30
82
8
130
34
18
2
45
1.61
57907--58048
30
4.8
30
86
5
166
30
20
4
44
1.70
75348--75375
2
14.0
2
100
0
56
50
0
0
50
1.00
78875--78917
6
7.2
6
100
0
86
51
0
32
16
1.45
83419--83468
4
12.5
4
78
16
50
66
0
34
0
0.92
83420--83468
15
3.6
15
79
20
63
65
0
34
0
0.93

Tables:   1

The End!