Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01013065.1 Kokia drynarioides strain JFW-HI SEQ_128083, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 851

Length: 1419
ACGTcount: A:0.27, C:0.20, G:0.22, T:0.31


Found at i:693 original size:13 final size:13

Alignment explanation


    Indices: 675--701  Score: 54
    Period size: 13  Copynumber: 2.1  Consensus size: 13

        665 ATCTTGGGCA

                         
        675 CTATATCGGATGC
          1 CTATATCGGATGC

                         
        688 CTATATCGGATGC
          1 CTATATCGGATGC

             
        701 C
          1 C

        702 ATTCTTGGCA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   14  1.00

ACGTcount: A:0.22, C:0.26, G:0.22, T:0.30


Consensus pattern (13 bp):   
CTATATCGGATGC
Done.