Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013070.1 Kokia drynarioides strain JFW-HI SEQ_128088, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  153997

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101--238
69
2.0
69
100
0
276
50
13
13
23
1.75
11854--11979
62
2.0
62
100
0
252
38
23
22
15
1.92
17041--17069
14
2.1
14
100
0
58
48
13
17
20
1.81
24269--24511
118
2.0
119
92
1
398
30
19
18
32
1.95
65155--65211
27
2.1
28
87
9
82
33
24
15
26
1.95
65213--65282
28
2.5
28
79
6
72
38
17
15
28
1.90
68523--68614
45
2.0
45
97
0
175
40
9
25
25
1.86
83102--83128
2
13.5
2
100
0
54
48
0
0
51
1.00
84926--84975
6
8.2
6
78
12
57
56
0
0
44
0.99
97318--97426
23
4.5
25
83
6
154
11
21
22
44
1.85
97297--97447
23
6.5
23
81
6
146
11
22
21
44
1.84
98871--98897
12
2.2
12
100
0
54
55
7
0
37
1.28
101668--101720
21
2.7
19
85
8
70
52
0
1
45
1.11
101670--101718
20
2.4
20
93
3
80
53
0
2
44
1.12
101670--101744
19
3.9
19
82
10
73
49
2
4
44
1.35
103448--103487
21
1.9
21
94
0
71
17
17
55
10
1.69
107186--107244
29
2.0
30
86
3
84
30
3
13
52
1.57
117857--117902
21
2.0
24
88
12
71
34
0
19
45
1.51
122941--122989
21
2.2
24
85
10
68
32
2
16
48
1.57
132232--132435
113
1.8
112
86
7
297
47
7
4
40
1.53
134081--134114
6
5.7
6
92
0
50
29
5
0
64
1.17
142797--142840
19
2.2
20
80
4
54
56
4
13
25
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142796--142852
20
2.9
20
76
10
55
56
5
14
24
1.59
143373--143424
26
2.1
26
85
7
72
38
13
3
44
1.62
147936--148106
87
2.0
84
93
3
288
30
18
32
18
1.95
148290--148315
13
2.0
13
100
0
52
84
0
15
0
0.62
148315--148347
9
3.6
9
95
4
57
54
0
42
3
1.15
148709--148751
21
2.1
21
91
4
70
25
0
13
60
1.34
149296--149341
14
3.1
15
71
22
51
60
8
0
30
1.26
149294--149343
16
3.2
16
73
21
61
60
8
0
32
1.26
150585--150667
43
1.9
43
82
4
105
32
12
10
44
1.76
151586--151610
12
2.1
12
100
0
50
36
0
8
56
1.29

Tables:   1

The End!