Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013071.1 Kokia drynarioides strain JFW-HI SEQ_128089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52890

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1139--1187
15
3.2
16
72
18
50
55
0
0
44
0.99
13168--13208
20
2.1
20
86
4
57
48
12
0
39
1.41
13698--13731
15
2.2
16
89
5
52
50
5
14
29
1.67
16800--16862
30
2.1
30
90
0
99
53
15
4
25
1.61
16943--16990
24
2.0
25
83
4
62
70
10
4
14
1.29
19365--19543
90
2.0
90
82
5
218
41
11
10
36
1.75
26841--26937
41
2.4
41
80
5
115
34
22
25
17
1.96
29947--29978
16
2.0
16
100
0
64
18
18
12
50
1.78
30623--30800
43
4.2
43
81
4
164
26
12
29
30
1.93
30623--30800
86
2.1
85
84
1
230
26
12
29
30
1.93
37048--37128
26
3.1
26
96
0
144
38
0
11
50
1.38
37120--38014
122
7.4
121
86
6
1239
40
3
6
49
1.45
37225--37421
59
3.3
59
66
21
147
41
5
5
47
1.49
37746--37963
108
2.0
108
90
1
348
40
2
7
49
1.45
37910--37951
21
2.0
22
86
9
61
47
0
2
50
1.14
37650--37963
109
2.8
107
84
9
353
40
2
7
50
1.42
40370--40410
18
2.3
18
87
8
57
48
0
17
34
1.47
40474--40686
112
1.9
112
95
0
381
32
10
17
38
1.84
42031--42228
41
4.8
41
82
0
216
28
26
17
27
1.98
42031--42227
82
2.4
82
84
1
261
28
26
17
27
1.97
42083--42252
41
4.2
40
80
2
126
27
22
19
30
1.98
42407--42465
18
3.3
18
70
15
59
3
5
59
32
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44234--44285
23
2.3
23
86
3
79
34
17
21
26
1.95
46584--46634
21
2.5
20
81
18
68
11
15
0
72
1.12
46592--46634
20
2.2
19
87
4
59
13
16
0
69
1.19
49087--49158
3
24.0
3
100
0
144
66
0
0
33
0.92
49157--49187
3
10.3
3
92
0
53
38
0
29
32
1.57
49154--49194
9
4.6
9
90
0
55
43
0
24
31
1.54
49229--49271
14
3.2
14
80
9
54
79
2
0
18
0.85
49224--49271
17
2.8
17
76
17
55
77
4
0
18
0.93
49767--49986
118
1.9
118
88
1
334
21
28
23
26
1.99

Tables:   1

The End!