Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013087.1 Kokia drynarioides strain JFW-HI SEQ_128105, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43145

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6847--7061
29
7.3
30
72
16
137
30
3
32
33
1.75
6877--7070
30
6.6
28
71
18
119
30
3
32
32
1.75
6848--7070
59
3.8
59
87
2
315
30
3
32
33
1.75
8964--9011
11
4.3
11
84
5
60
62
0
0
37
0.95
8937--9045
17
6.4
17
71
7
69
53
2
0
43
1.21
8968--9014
6
8.2
6
83
9
53
55
0
0
44
0.99
14295--14364
35
2.0
35
100
0
140
34
28
14
22
1.93
16380--16529
29
5.1
29
70
15
128
24
15
2
58
1.48
16349--16528
89
2.0
89
100
0
360
26
14
3
55
1.55
26568--26593
2
13.0
2
100
0
52
50
0
0
50
1.00
31008--31081
22
3.3
22
79
9
78
44
27
14
13
1.83
32958--32982
2
12.5
2
100
0
50
52
0
0
48
1.00
40210--40254
20
2.2
20
92
7
74
66
0
0
33
0.92
41471--41505
13
2.6
14
86
13
56
14
5
2
77
1.07
42262--42311
26
2.0
25
88
11
75
56
0
2
42
1.11
42255--42332
41
1.9
39
84
5
102
55
0
2
42
1.13
42265--42320
26
2.2
26
81
12
62
57
0
3
39
1.16
42611--42658
23
2.2
21
82
14
53
39
4
2
54
1.32

Tables:   1

The End!