Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013099.1 Kokia drynarioides strain JFW-HI SEQ_128117, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97053

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5408--5473
17
3.9
17
77
0
60
50
12
16
21
1.77
5955--5994
14
2.8
14
84
3
53
0
27
12
60
1.33
12413--12468
28
2.0
28
96
0
103
30
17
30
21
1.96
21132--21186
22
2.6
21
77
11
67
25
3
1
69
1.15
22277--22315
19
2.1
18
90
4
60
66
2
5
25
1.25
22731--22759
8
3.8
8
90
9
51
55
0
0
44
0.99
24238--24279
19
2.2
20
86
4
59
57
0
0
42
0.99
25574--25631
23
2.6
23
83
2
64
53
0
3
43
1.17
32228--32273
20
2.3
20
92
0
74
43
19
28
8
1.80
33763--33832
3
23.3
3
100
0
140
65
0
0
34
0.93
34384--34695
127
2.5
127
85
1
401
29
17
26
26
1.97
35935--35961
2
13.5
2
100
0
54
51
0
0
48
1.00
35961--35996
2
18.0
2
100
0
72
50
0
50
0
1.00
36467--36548
37
2.3
35
80
12
80
34
3
1
60
1.22
37464--37538
30
2.5
29
82
6
87
52
2
1
44
1.23
37527--37567
15
2.5
17
80
11
59
65
0
0
34
0.93
37996--38037
19
2.2
19
95
0
75
21
16
11
50
1.77
46160--46201
21
2.0
21
90
0
66
40
16
4
38
1.70
50027--50080
26
2.1
26
100
0
108
42
11
25
20
1.85
51317--51456
69
2.1
66
85
4
181
42
7
7
42
1.61
52358--52404
19
2.5
19
80
10
53
59
4
4
31
1.36
55538--56269
383
1.9
383
96
0
1349
41
12
16
30
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57988--58029
17
2.4
17
92
4
66
21
26
2
50
1.61
57968--58015
24
2.0
24
87
0
69
18
33
2
45
1.61
58663--58702
21
1.9
21
84
0
53
15
12
12
60
1.60
71674--71906
79
2.9
78
91
4
360
24
21
18
34
1.96
72121--72365
51
4.9
50
82
5
273
37
13
14
34
1.85
75926--76155
79
2.9
79
87
2
311
26
21
18
33
1.96
76369--76596
101
2.3
101
88
2
332
39
13
12
35
1.82
76352--76596
51
4.8
50
85
2
301
38
13
12
35
1.82
86569--86630
30
2.1
30
93
0
106
27
4
11
56
1.54
90216--90254
16
2.6
15
88
8
53
58
0
38
2
1.12
90228--90276
21
2.3
22
82
10
66
65
0
32
2
1.04
92486--92647
30
5.6
30
73
12
115
35
25
2
35
1.70
92523--92647
29
4.4
28
74
13
103
35
28
1
34
1.67
93458--93504
24
1.9
25
86
4
69
51
10
4
34
1.56
95030--95127
41
2.4
41
84
0
133
37
14
25
22
1.92

Tables:   1

The End!