Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013146.1 Kokia drynarioides strain JFW-HI SEQ_128165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100185

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1234--1303
34
2.1
34
94
0
122
41
7
15
35
1.75
1444--1526
29
2.8
29
78
12
98
45
6
16
31
1.72
1542--1584
21
2.0
22
90
4
70
39
11
11
37
1.78
2687--2729
11
3.8
11
80
17
52
30
2
2
65
1.18
2690--2733
23
1.9
23
90
0
70
31
2
4
61
1.28
5754--5898
23
6.4
22
82
4
110
40
23
24
12
1.89
29979--30003
12
2.1
12
100
0
50
48
16
16
20
1.82
33522--33569
15
3.1
15
80
11
51
22
6
2
68
1.23
33527--33572
17
2.9
16
84
9
58
21
4
2
71
1.14
33527--33572
8
5.8
8
80
10
58
21
4
2
71
1.14
33522--33570
17
3.1
16
82
8
55
22
6
2
69
1.21
33528--33582
25
2.2
24
87
3
74
21
5
1
70
1.16
33627--33653
2
13.5
2
100
0
54
48
0
0
51
1.00
36224--36253
9
3.3
9
90
0
51
66
20
0
13
1.24
36660--36704
21
2.1
21
83
0
54
53
0
0
46
1.00
37310--37352
18
2.4
19
80
11
54
58
0
0
41
0.98
50238--50435
98
2.0
99
99
1
389
35
17
11
36
1.85
53439--53472
17
2.0
17
94
0
59
44
5
26
23
1.76
64012--64047
16
2.4
15
86
13
56
27
25
19
27
1.99
73397--73447
20
2.5
20
81
9
59
62
3
3
29
1.31
73397--73447
21
2.5
21
84
6
61
62
3
3
29
1.31
74903--74934
7
4.6
7
96
0
55
9
0
3
87
0.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79495--79647
59
2.6
59
82
4
193
33
5
26
33
1.79
79541--79838
29
10.1
29
71
20
208
32
4
30
32
1.76
79447--79691
118
2.1
117
80
7
264
33
5
28
31
1.81
79495--79679
59
3.2
58
80
5
185
32
4
28
33
1.79
79518--79838
59
5.4
56
79
12
203
31
4
30
33
1.76
79601--79780
87
2.0
89
91
2
292
31
4
32
31
1.78
79630--79849
60
3.7
59
87
7
272
30
3
31
34
1.75
80867--80913
12
3.8
12
83
5
58
31
2
8
57
1.41
80899--80967
33
2.1
33
83
5
86
37
2
7
52
1.44
81639--81720
37
2.3
35
87
4
110
56
3
3
36
1.35
81630--81720
17
5.2
17
80
10
85
56
3
3
37
1.32
82142--82729
206
2.9
205
89
3
853
20
22
21
35
1.96
94610--94971
59
6.1
58
78
9
267
33
1
30
33
1.69
94610--94971
30
12.2
29
73
12
243
33
1
30
33
1.69
94830--94982
29
5.2
29
75
12
132
29
2
30
37
1.71
96067--96123
30
1.9
30
85
0
78
31
1
14
52
1.51
96815--96905
6
15.5
6
68
17
57
54
3
3
38
1.33
96821--96905
37
2.4
36
86
5
118
55
3
3
37
1.34
96815--96905
17
5.2
17
78
10
85
54
3
3
38
1.33

Tables:   1

The End!