Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013147.1 Kokia drynarioides strain JFW-HI SEQ_128166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  160002

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8804--8910
20
5.2
20
71
7
74
31
7
12
48
1.68
18638--18675
14
2.7
14
84
11
51
10
18
2
68
1.30
18991--19033
20
2.2
20
83
8
52
18
23
4
53
1.63
21627--21671
22
2.0
24
86
8
67
75
0
20
4
0.97
21636--21677
17
2.6
16
82
14
50
78
0
19
2
0.86
29538--29602
30
2.3
29
79
12
73
73
4
13
7
1.21
32169--32198
15
2.0
15
93
0
51
30
6
3
60
1.39
43519--43574
16
3.5
15
79
15
60
28
0
0
71
0.86
43523--43576
17
3.1
17
84
13
65
27
0
0
72
0.85
46974--46999
12
2.2
12
100
0
52
34
7
15
42
1.75
47383--47614
96
2.4
97
94
0
403
30
8
21
39
1.83
47798--47827
15
2.0
15
93
0
51
30
6
10
53
1.60
50657--50810
68
2.3
68
81
0
182
31
21
20
25
1.98
50723--50814
34
2.7
34
81
3
96
34
20
19
25
1.96
54454--54479
2
13.0
2
100
0
52
50
0
0
50
1.00
54986--55028
22
2.0
22
81
9
52
34
0
13
51
1.42
65906--65962
25
2.2
25
81
9
62
52
1
0
45
1.11
65916--65965
26
2.0
25
88
11
75
46
2
0
52
1.12
65949--65996
18
2.7
18
80
0
51
37
2
6
54
1.38
74245--74273
15
1.9
15
100
0
58
41
24
6
27
1.80
84882--84919
19
2.0
19
85
10
51
50
0
13
36
1.42
91067--91264
43
4.6
43
81
2
220
24
25
18
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91072--91236
86
1.9
86
88
2
251
24
24
18
31
1.98
91904--91951
15
3.3
15
72
16
55
29
2
12
56
1.48
91898--91955
29
2.0
28
96
3
107
27
1
10
60
1.39
94399--94484
40
2.2
39
89
4
127
23
23
20
32
1.98
94458--94576
42
2.9
40
82
6
123
22
24
13
39
1.90
94613--94721
40
2.7
40
81
4
130
26
20
15
37
1.92
119482--119538
28
2.0
28
100
0
114
33
17
10
38
1.84
121690--121744
25
2.2
26
87
9
78
65
9
7
18
1.44
141068--141098
15
2.1
15
100
0
62
29
51
0
19
1.47
142847--142876
15
2.0
15
93
0
51
26
23
10
40
1.86
146688--146856
83
2.0
84
80
8
193
48
15
17
18
1.81
150405--150447
12
3.8
12
87
12
72
0
32
0
67
0.91
150405--150446
22
1.9
22
100
0
84
0
30
0
69
0.89

Tables:   1

The End!