Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013160.1 Kokia drynarioides strain JFW-HI SEQ_128179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78670

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8450--8502
21
2.5
21
85
11
65
32
22
13
32
1.92
15035--15162
43
3.0
43
78
11
145
39
10
22
27
1.88
15043--15245
43
4.8
41
73
8
138
36
12
24
26
1.91
23378--23436
9
6.3
9
79
12
66
30
0
1
67
1.00
23788--24205
104
4.0
104
90
0
631
26
27
16
29
1.97
27364--27459
48
2.0
48
100
0
192
27
31
8
33
1.86
32620--32662
20
2.1
21
82
4
52
32
0
25
41
1.56
34516--34582
22
2.8
24
84
8
84
14
22
17
44
1.86
34541--34588
22
2.2
22
81
7
53
18
22
16
41
1.90
35223--35272
20
2.5
20
100
0
100
48
6
6
40
1.52
38803--38841
20
2.0
20
84
0
51
46
10
2
41
1.51
39248--39301
25
2.2
24
83
6
72
44
0
1
53
1.11
39261--39309
19
2.7
18
84
6
62
53
0
2
44
1.12
39306--39382
29
2.7
28
78
13
93
38
0
1
59
1.06
40039--40080
14
3.2
13
90
6
59
45
0
19
35
1.50
47481--47524
22
2.0
23
90
4
72
45
13
4
36
1.64
54953--54995
17
2.5
17
84
3
50
18
27
4
48
1.68
62162--62226
21
3.1
21
80
12
80
41
20
4
33
1.72
71347--71511
82
2.0
82
98
0
321
35
16
21
26
1.95

Tables:   1

The End!