Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013173.1 Kokia drynarioides strain JFW-HI SEQ_128192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49791

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
499--672
23
7.3
23
80
8
172
10
23
22
42
1.85
14348--14405
17
3.5
17
76
6
57
53
0
3
43
1.17
14809--14866
10
5.6
10
75
6
53
70
3
3
22
1.17
14809--14868
21
2.9
20
82
7
75
68
3
3
25
1.20
14818--14873
21
2.6
21
88
2
76
67
1
3
26
1.16
14890--14955
21
3.2
21
89
6
75
71
0
4
24
1.05
14908--14955
21
2.3
21
100
0
96
75
0
4
20
0.97
15766--15827
27
2.3
27
88
5
90
61
1
0
37
1.06
17760--17811
23
2.2
23
79
3
59
44
15
9
30
1.78
17929--17975
24
2.0
24
95
4
87
44
17
17
21
1.86
19664--19696
14
2.3
15
85
15
52
60
0
3
36
1.12
20057--20124
19
3.5
19
86
9
77
57
7
0
35
1.27
20138--20194
21
2.8
21
81
2
62
68
7
1
22
1.23
23070--23109
15
2.7
15
85
14
57
60
0
2
37
1.11
23101--23130
2
15.0
2
92
0
51
53
0
0
46
1.00
26397--26539
52
2.8
52
86
3
182
32
24
15
27
1.95
31899--31947
17
2.9
17
84
0
53
34
2
4
59
1.28
31895--31949
23
2.4
23
81
6
67
40
1
3
54
1.28
31954--31984
15
2.1
15
93
0
53
58
16
6
19
1.59
32549--32580
9
3.4
9
95
4
55
68
0
0
31
0.90
32941--32986
21
2.1
22
84
11
60
23
15
19
41
1.89
32940--32989
22
2.3
20
80
16
55
26
14
18
42
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33696--34052
30
12.2
30
80
8
331
37
24
0
37
1.61
33696--34072
57
6.4
59
83
5
369
37
24
1
36
1.64
34039--34109
37
1.9
37
91
0
115
43
19
7
29
1.77
34076--34137
29
2.1
29
84
0
79
37
24
6
32
1.81
34116--34245
28
4.5
29
66
21
76
33
29
4
33
1.78
36794--36922
52
2.5
52
89
0
186
31
22
15
30
1.95
39874--39922
19
2.5
19
87
9
64
53
8
2
36
1.43
41504--41537
18
2.0
16
88
11
50
29
2
17
50
1.61
43033--43091
22
2.6
22
81
7
57
57
1
1
38
1.19
43645--43816
59
2.9
60
81
6
199
26
13
11
48
1.76
49022--49299
58
4.8
59
77
12
206
33
5
26
33
1.80
49081--49306
29
7.7
29
77
11
203
34
4
26
34
1.77
49068--49307
117
2.0
116
83
5
295
33
5
27
34
1.78
49068--49307
58
4.1
59
81
6
256
33
5
27
34
1.78

Tables:   1

The End!