Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013176.1 Kokia drynarioides strain JFW-HI SEQ_128195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106579

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4836--4870
17
2.1
17
89
10
54
51
0
0
48
1.00
5501--5542
18
2.3
18
87
0
57
30
0
2
66
1.04
5510--5544
18
1.9
18
94
0
61
28
0
2
68
1.04
5777--5922
9
16.0
9
67
17
61
35
4
2
57
1.32
5819--5866
20
2.5
19
80
6
60
39
2
2
56
1.23
5762--5867
46
2.3
45
78
13
110
33
3
2
59
1.30
6827--6873
12
3.9
12
81
10
60
48
17
17
17
1.81
10403--10433
15
2.1
15
93
0
53
16
0
0
83
0.64
11154--11192
21
1.9
21
84
5
53
20
5
5
69
1.28
12386--12428
18
2.3
19
84
11
54
13
9
2
74
1.16
12386--12444
27
2.1
27
82
14
68
16
6
3
72
1.20
18885--18934
24
2.0
26
84
11
68
46
8
2
44
1.44
26274--26315
3
14.0
3
94
0
75
66
2
0
30
1.04
27176--27209
13
2.5
13
90
4
50
41
0
0
58
0.98
29773--29829
16
3.6
17
73
20
61
40
0
14
45
1.44
29773--29830
30
1.9
30
96
0
107
41
0
13
44
1.44
38120--38172
16
3.3
15
84
12
61
71
3
0
24
1.02
38117--38172
8
6.8
8
75
15
51
69
3
0
26
1.04
38160--38210
25
2.1
25
82
10
61
64
0
0
35
0.94
39037--39114
35
2.2
35
88
4
122
64
3
11
20
1.42
39065--39120
29
1.9
29
88
0
85
62
1
10
25
1.37
43952--44068
32
3.8
30
78
7
110
29
10
14
46
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43943--44078
31
4.5
30
73
9
98
30
11
14
42
1.82
50482--50513
14
2.1
16
88
11
50
34
12
12
40
1.81
66653--66838
60
3.1
58
78
7
169
46
12
15
25
1.80
69604--69684
40
2.0
40
97
0
153
50
9
14
24
1.73
71938--71998
31
2.0
31
100
0
122
42
14
9
32
1.79
77384--77419
2
18.0
2
100
0
72
50
0
0
50
1.00
79769--79811
20
2.2
20
82
0
50
23
0
9
67
1.19
80526--80562
19
1.9
19
88
0
56
24
0
10
64
1.25
83395--83427
2
16.5
2
100
0
66
48
0
0
51
1.00
83497--83539
14
3.0
15
73
13
54
65
0
9
25
1.22
84698--84854
78
2.0
78
93
0
269
49
10
12
27
1.73
87563--87606
21
2.1
21
86
0
61
25
13
6
54
1.63
89069--89094
4
6.5
4
100
0
52
23
0
0
76
0.78
98529--98570
3
14.0
3
100
0
84
33
33
0
33
1.58
101877--101994
58
2.0
58
88
3
175
32
0
19
48
1.49
103791--103874
30
2.6
30
80
14
80
48
3
4
42
1.41
104877--105052
96
1.8
95
81
7
221
34
14
22
28
1.93
105359--105707
59
5.9
58
81
6
369
31
3
29
35
1.75
105364--105707
30
11.6
30
76
9
237
31
3
29
35
1.74
105359--105704
119
2.9
119
82
4
369
31
3
29
35
1.75

Tables:   1

The End!