Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013180.1 Kokia drynarioides strain JFW-HI SEQ_128199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  197382

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61--151
3
30.0
3
90
6
139
63
2
1
32
1.13
1147--1466
29
10.8
30
76
9
300
35
27
2
34
1.69
1146--1466
59
5.4
58
90
3
464
35
28
2
33
1.69
12842--13403
207
2.7
207
87
3
785
35
21
22
21
1.96
13728--13809
17
4.8
17
76
0
83
41
2
6
50
1.40
23536--24097
207
2.7
207
87
3
785
35
21
22
21
1.96
24422--24503
17
4.8
17
76
0
83
41
2
6
50
1.40
34230--34791
207
2.7
207
87
3
785
35
21
22
21
1.96
35116--35197
17
4.8
17
76
0
83
41
2
6
50
1.40
35850--35907
3
20.0
3
84
10
68
63
3
1
31
1.21
36903--37395
29
16.7
31
75
11
437
36
27
1
34
1.64
36902--37396
59
8.4
59
86
6
558
36
28
1
34
1.64
40898--40937
20
2.0
20
90
0
62
62
0
20
17
1.33
40906--40941
14
2.7
13
87
8
54
66
0
22
11
1.22
59044--59136
47
2.0
47
97
0
177
34
19
9
36
1.84
62850--62916
26
2.6
26
79
11
75
29
26
19
23
1.98
70772--70812
18
2.3
18
95
0
73
19
21
4
53
1.63
71154--71208
27
2.0
27
85
0
74
27
25
10
36
1.89
75927--76044
62
1.9
59
86
5
164
40
3
5
50
1.41
76138--76175
14
2.7
14
95
0
67
52
7
15
23
1.69
79484--79546
27
2.4
26
84
5
74
55
4
1
38
1.31
86658--86693
18
2.0
18
88
0
54
13
30
11
44
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86790--86839
24
2.1
24
100
0
100
44
8
12
36
1.71
88112--88146
13
2.6
14
91
8
56
74
5
0
20
1.02
88166--88221
29
2.0
28
86
10
80
57
10
1
30
1.43
100087--100122
10
3.5
10
88
3
54
25
2
22
50
1.63
103412--103460
22
2.2
22
85
7
64
2
14
0
83
0.73
103412--103460
9
5.9
8
79
15
55
2
14
0
83
0.73
103478--103542
16
4.1
16
77
16
55
3
13
3
80
0.96
103515--103546
16
2.0
16
100
0
64
6
12
0
81
0.87
109228--109265
17
2.1
19
90
9
62
65
5
7
21
1.38
109982--110179
99
2.0
99
95
0
360
33
12
24
29
1.92
111175--111293
47
2.5
47
75
14
111
38
19
11
30
1.87
137833--137873
15
2.7
15
80
0
55
51
2
0
46
1.14
139274--139462
24
8.4
23
65
18
94
23
48
7
20
1.76
139298--139490
42
4.4
45
80
12
233
24
46
7
20
1.77
139298--139490
87
2.2
87
97
0
359
24
46
7
20
1.77
139524--139597
27
2.7
27
80
10
71
27
51
1
20
1.55
145235--145280
10
4.6
10
78
15
51
10
8
0
80
0.91
146364--146447
34
2.4
34
82
8
96
28
15
22
33
1.95
152140--152352
6
34.3
6
87
6
177
75
2
7
14
1.14
152198--152349
7
23.9
7
93
6
199
75
0
10
13
1.04
170708--170740
14
2.4
14
95
5
59
45
9
18
27
1.79
172408--172453
23
1.9
25
86
8
69
58
6
2
32
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172527--172560
13
2.6
13
85
0
50
58
11
0
29
1.33
179662--179873
25
8.4
25
80
2
228
34
23
16
25
1.95
179669--179873
75
2.7
75
82
3
268
35
22
16
25
1.95
195534--195592
17
3.5
17
76
0
55
20
16
13
49
1.80

Tables:   1

The End!