Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013190.1 Kokia drynarioides strain JFW-HI SEQ_128209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53186

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
618--954
29
11.5
28
69
14
148
31
26
2
39
1.71
607--954
59
5.9
59
75
12
247
31
25
3
39
1.72
616--984
117
3.1
117
83
5
415
31
26
2
39
1.71
1916--1976
28
2.3
25
83
11
68
52
4
9
32
1.56
7856--7935
42
1.9
41
80
12
92
27
3
6
62
1.36
8839--8890
19
2.7
20
82
11
63
38
0
1
59
1.08
9454--9496
17
2.4
17
88
11
59
27
9
0
62
1.25
10137--10174
14
2.5
15
87
12
51
50
2
0
47
1.15
11363--11400
19
1.9
20
89
10
60
65
0
5
28
1.14
15937--16020
21
4.2
20
78
18
86
57
3
1
38
1.24
15955--15987
16
2.1
16
88
11
50
60
6
0
33
1.21
15938--16028
38
2.3
39
81
10
98
56
4
2
37
1.32
15972--16028
19
2.8
20
85
12
73
54
3
3
38
1.35
15972--16029
20
2.9
20
80
10
73
55
3
3
37
1.34
15969--16104
29
4.6
29
71
11
96
58
1
5
34
1.31
16085--16137
19
2.8
20
78
21
60
67
1
5
24
1.22
16983--17022
19
2.2
18
90
4
62
57
0
2
40
1.12
16999--17073
2
40.0
2
76
17
63
50
1
1
46
1.18
16970--17077
28
4.1
27
74
18
79
52
0
1
44
1.18
26150--26188
20
2.0
20
94
0
69
23
20
15
41
1.90
26770--26817
19
2.5
19
86
6
62
27
2
2
68
1.11
32199--32280
31
2.6
31
84
0
101
23
21
29
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32634--32798
74
2.2
75
87
5
242
60
18
7
13
1.57
34362--34432
35
2.1
34
86
2
97
30
22
21
25
1.98
34367--34449
34
2.4
35
83
2
96
34
21
19
24
1.96
36272--36313
22
1.9
22
85
0
57
66
23
0
9
1.21
40368--40436
27
2.6
25
80
11
77
27
18
23
30
1.98
40714--40930
107
2.0
107
98
0
416
44
8
19
26
1.80
45063--45096
15
2.2
16
89
5
52
32
0
0
67
0.91
47490--47520
14
2.2
14
100
0
62
64
0
0
35
0.94
51357--51387
16
1.9
16
93
0
53
19
9
3
67
1.33
52984--53052
12
5.8
12
79
8
79
7
4
18
69
1.29
53005--53050
23
2.0
23
91
4
74
6
2
19
71
1.18
52984--53052
35
2.0
35
88
5
104
7
4
18
69
1.29
53102--53175
17
4.4
17
89
6
107
45
0
1
52
1.09
53124--53177
6
9.2
6
75
24
53
50
0
0
50
1.00

Tables:   1

The End!