Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013193.1 Kokia drynarioides strain JFW-HI SEQ_128212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54078

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1905--1930
2
13.0
2
100
0
52
50
0
0
50
1.00
3415--3488
37
2.0
37
100
0
148
45
8
5
40
1.56
3578--3615
3
12.7
3
94
0
67
63
0
2
34
1.09
13291--13327
17
2.2
17
95
0
65
45
18
0
35
1.50
13314--13342
15
2.0
15
93
6
51
55
6
0
37
1.27
21580--21611
16
2.0
16
100
0
64
43
37
6
12
1.68
24214--24238
11
2.3
11
100
0
50
0
16
0
84
0.63
28497--28553
24
2.3
25
81
9
71
38
35
14
12
1.83
28507--28552
24
1.9
24
95
0
83
36
34
13
15
1.86
28547--28721
24
7.3
24
82
0
188
29
21
20
29
1.98
28547--28723
72
2.5
72
84
0
228
29
21
19
29
1.98
31921--31963
22
2.0
22
90
0
68
51
2
0
46
1.13
36643--36674
12
2.7
12
100
0
64
34
6
0
59
1.23
37464--37599
3
43.0
3
71
11
85
56
4
2
36
1.32
37567--37609
16
2.7
16
81
0
50
58
0
0
41
0.98
37525--37617
40
2.3
40
78
10
100
55
3
2
38
1.28
38713--38850
29
4.5
30
74
11
120
32
24
2
39
1.70
38713--38900
62
3.1
59
81
11
213
34
25
3
36
1.74
40154--40229
3
25.3
3
100
0
152
67
0
0
32
0.91
42939--42982
22
2.0
22
100
0
88
50
0
9
40
1.34
46899--46959
22
2.7
23
82
7
72
34
11
14
39
1.82
47001--47041
20
2.2
19
86
8
57
39
7
12
41
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47211--47251
14
2.9
14
81
0
55
41
2
4
51
1.36
48343--48435
43
2.2
43
96
0
168
48
26
4
20
1.68
52540--52574
18
1.9
18
88
0
52
37
5
14
42
1.69

Tables:   1

The End!