Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013196.1 Kokia drynarioides strain JFW-HI SEQ_128215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81653

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3827--4284
233
2.0
233
99
0
898
39
16
9
34
1.81
8794--9058
30
8.9
29
77
13
193
38
2
20
38
1.65
8828--9058
61
3.9
60
78
10
260
39
1
19
39
1.60
8828--9069
30
8.1
30
79
11
221
39
1
20
38
1.62
17605--17636
14
2.3
15
89
10
50
62
9
6
21
1.47
19222--19265
12
3.8
12
84
3
63
77
0
9
13
0.99
19213--19274
24
3.0
20
76
19
63
79
0
6
14
0.93
28570--28641
35
2.1
35
97
0
135
33
11
16
38
1.84
28683--28736
23
2.3
24
83
6
74
50
7
11
31
1.66
28695--28768
24
3.1
24
86
1
96
55
6
12
25
1.61
39540--39572
16
2.1
16
88
11
50
21
3
0
75
0.93
42453--42494
22
1.9
22
90
0
66
42
19
23
14
1.87
42617--42642
2
13.0
2
100
0
52
50
0
0
50
1.00
44807--45140
165
2.0
166
91
1
546
35
25
10
28
1.89
49834--49877
17
2.6
17
81
0
52
36
2
2
59
1.23
49893--49945
17
3.1
16
79
12
61
45
1
1
50
1.23
49856--49920
34
1.9
34
83
0
85
36
3
9
50
1.50
49892--49949
6
10.0
6
71
14
50
46
1
1
50
1.22
50665--50698
13
2.6
13
90
0
50
61
0
5
32
1.20
51766--51931
30
5.7
28
74
12
122
35
19
1
42
1.62
51752--51990
29
8.1
28
71
10
104
35
21
2
40
1.67
51795--52014
59
3.7
57
77
7
167
34
21
2
41
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51892--52073
29
6.2
29
69
14
97
31
25
2
40
1.70
51925--52112
59
3.2
59
81
8
220
30
24
4
40
1.74
52147--52202
28
2.0
28
85
0
76
25
28
14
32
1.94
56968--56999
15
2.1
15
94
0
55
78
0
21
0
0.76
57792--57852
31
1.9
32
86
3
88
78
4
14
1
0.99
59092--59476
48
8.0
48
85
3
416
38
22
25
13
1.90
59611--59928
102
3.1
102
97
0
591
35
16
17
30
1.92
59623--59897
52
5.4
51
67
10
202
35
16
17
30
1.93
60267--60296
13
2.3
13
94
0
51
66
0
23
10
1.21
61851--61951
38
2.6
40
73
10
109
21
18
28
30
1.97
61849--61955
37
2.8
38
77
5
99
22
17
28
31
1.97
62726--62774
20
2.4
20
89
3
71
22
20
8
48
1.75
62811--63162
102
3.4
102
88
0
506
36
15
16
31
1.90
63493--63545
17
3.1
16
79
12
61
45
1
1
50
1.23
63492--63549
6
10.0
6
71
14
50
46
1
1
50
1.22
65344--65620
58
4.8
56
76
13
201
33
24
2
38
1.69
65316--65620
29
10.4
31
70
13
175
33
24
2
39
1.68
65396--65658
59
4.5
56
75
11
176
31
26
2
38
1.70
65695--65753
27
2.1
28
87
3
84
32
23
11
32
1.91

Tables:   1

The End!