Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013224.1 Kokia drynarioides strain JFW-HI SEQ_128243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  175959

Tables:   1   

This is table  1  of  1  ( 59 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4264--4445
85
2.1
85
86
2
258
24
18
26
30
1.97
4264--4447
42
4.3
42
82
3
217
23
17
26
31
1.97
4706--4735
14
2.1
14
93
0
51
73
3
6
16
1.18
4737--4779
19
2.3
19
84
8
52
58
4
0
37
1.19
11700--11747
21
2.2
22
92
3
80
68
2
12
16
1.29
12528--12568
12
3.1
14
80
16
52
73
7
4
14
1.22
12559--12601
19
2.3
19
84
8
52
58
4
0
37
1.19
12558--12639
31
2.7
29
80
10
76
60
3
0
35
1.14
15599--15715
62
1.9
59
87
5
171
41
1
4
52
1.31
22176--22373
50
3.9
50
87
4
254
39
12
14
32
1.84
22163--22386
101
2.2
102
82
4
283
38
12
14
33
1.84
24200--24283
18
4.8
17
71
26
59
10
22
0
66
1.22
24211--24255
14
3.3
13
82
17
56
6
28
0
64
1.19
24246--24292
21
2.2
21
84
0
58
10
19
2
68
1.30
24328--24363
18
2.1
19
85
15
51
16
19
0
63
1.30
24323--24365
16
2.6
16
75
17
52
16
20
0
62
1.32
25157--25248
23
3.7
23
73
17
85
15
13
3
68
1.33
25293--26108
434
1.9
423
85
5
1129
38
15
15
30
1.89
26842--27009
50
3.3
50
87
6
216
37
12
14
35
1.84
30381--30456
11
6.8
11
70
26
54
43
1
1
53
1.17
30427--30479
20
2.7
19
85
8
63
39
1
1
56
1.21
34144--34715
207
2.7
211
80
8
561
46
7
9
36
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34761--34804
16
2.6
17
85
7
63
47
2
2
47
1.27
39251--39542
101
2.9
100
76
3
293
28
19
16
35
1.94
39599--39759
50
3.2
50
72
10
166
29
19
15
35
1.93
39369--39718
177
2.0
179
84
3
463
28
18
17
35
1.94
39587--39779
100
2.0
97
86
5
271
27
19
15
37
1.92
46873--46933
13
4.4
14
73
22
58
72
1
1
24
1.03
48297--48346
22
2.3
23
80
16
61
10
8
2
80
0.99
48537--48592
28
1.9
30
82
7
71
12
5
39
42
1.65
48641--48671
16
2.0
16
93
6
55
32
6
16
45
1.72
56648--56714
28
2.4
28
85
5
82
32
14
19
32
1.92
56695--56758
28
2.3
27
84
7
76
26
15
21
35
1.94
60767--60808
9
4.7
9
80
8
50
0
16
0
83
0.65
60767--60806
17
2.4
17
91
8
64
0
17
0
82
0.67
61540--61566
3
9.0
3
100
0
54
0
33
0
66
0.92
78667--78706
21
1.9
21
90
10
64
0
25
5
70
1.08
86587--86632
18
2.6
18
82
6
58
17
19
23
39
1.92
87844--87877
18
1.9
17
88
5
50
55
8
11
23
1.63
95141--95179
21
1.9
21
94
5
71
43
15
15
25
1.86
126463--126505
18
2.2
20
84
8
54
25
4
2
67
1.22
129462--129781
30
10.8
30
73
12
189
38
1
23
37
1.63
129473--129751
90
3.1
87
79
6
292
38
1
22
37
1.62
131878--132061
77
2.4
79
83
7
216
26
21
29
22
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132035--132834
39
20.7
38
72
7
396
25
19
31
23
1.98
131911--132606
117
6.0
114
72
11
409
26
19
30
22
1.98
131912--132326
230
1.8
230
79
6
493
25
20
31
23
1.98
132264--132758
78
6.4
78
82
1
521
26
20
30
22
1.98
132302--132757
231
2.0
233
83
3
578
26
19
30
22
1.98
141766--142079
60
5.3
60
74
9
236
41
1
21
35
1.64
141884--142087
89
2.3
90
84
8
256
44
1
18
34
1.61
141790--142087
30
10.0
30
75
10
211
41
2
21
34
1.66
154137--154295
80
2.0
80
96
0
291
24
23
20
32
1.98
154929--155092
58
2.8
57
83
9
208
53
2
1
43
1.22
164713--164759
20
2.3
21
88
3
69
55
14
29
0
1.40
165504--165537
11
3.0
11
87
8
50
82
0
17
0
0.67
171959--172125
84
2.0
84
95
0
298
23
19
26
30
1.98
174308--174395
43
2.0
43
100
0
176
27
20
20
31
1.97
175352--175395
21
2.1
21
91
0
70
56
13
29
0
1.38

Tables:   1

The End!