Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013242.1 Kokia drynarioides strain JFW-HI SEQ_128261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58535

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4728--4792
32
2.0
33
84
3
87
33
10
12
43
1.77
8331--8375
23
2.0
23
86
4
65
31
0
2
66
1.04
15755--15817
29
2.1
30
88
5
92
41
9
6
42
1.63
16050--16094
22
2.0
24
86
8
67
40
0
8
51
1.33
18837--18882
12
3.8
12
82
0
56
21
17
13
47
1.81
18835--18882
24
2.0
24
91
0
78
25
16
12
45
1.82
18986--19042
24
2.4
24
76
2
62
26
12
19
42
1.86
23051--23091
18
2.3
19
80
20
52
56
0
0
43
0.99
23576--23617
22
2.0
22
90
4
68
61
23
7
7
1.47
23577--23625
22
2.2
22
85
7
64
65
18
6
10
1.43
29942--30011
30
2.3
31
80
11
83
48
11
5
34
1.63
30405--30485
39
2.0
40
80
2
92
40
2
11
45
1.53
32547--32579
16
2.0
17
94
5
59
39
0
0
60
0.97
33908--33959
21
2.4
22
82
17
65
55
0
1
42
1.10
36009--36047
13
2.9
13
84
3
51
38
0
20
41
1.53
36406--36454
24
2.0
24
100
0
98
59
12
4
24
1.50
38545--38655
30
3.7
30
77
7
134
27
27
20
23
1.99
38678--38741
33
1.9
33
87
6
94
28
17
20
34
1.95
41657--41719
23
2.7
23
80
17
69
42
3
1
52
1.27
42471--42521
19
2.8
18
80
14
59
70
1
0
27
0.98
42473--42521
18
2.7
17
78
12
53
71
2
0
26
0.97
45149--45462
29
10.8
29
77
13
249
35
3
27
33
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45196--45461
87
3.1
86
84
5
340
34
3
28
33
1.74
47193--47256
6
11.0
6
80
6
69
53
1
0
45
1.10
47193--47263
17
4.1
17
88
1
106
53
1
0
45
1.09
49408--49645
51
4.6
51
87
2
316
32
15
23
28
1.95
56684--56728
21
2.1
22
83
4
56
60
2
2
35
1.22
56863--56899
17
2.2
17
90
9
58
45
0
0
54
1.00
57265--57309
19
2.5
19
85
7
67
40
0
2
57
1.11
57260--57339
17
4.6
17
78
6
88
43
2
3
50
1.33

Tables:   1

The End!