Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013244.1 Kokia drynarioides strain JFW-HI SEQ_128263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  192555

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5195--5247
25
2.1
25
89
0
79
47
1
3
47
1.31
5449--5486
20
1.9
20
84
10
51
47
7
2
42
1.46
5447--5493
21
2.3
20
78
10
51
48
8
2
40
1.45
7930--7976
24
2.0
24
86
0
67
36
4
10
48
1.57
12341--12387
24
2.0
24
82
0
58
36
2
10
51
1.49
18121--18162
2
21.0
2
95
0
75
50
47
0
2
1.14
20219--20303
28
3.0
28
64
21
68
29
24
18
27
1.98
20123--20451
57
5.8
57
85
3
403
30
25
17
26
1.97
20123--20453
114
2.9
114
86
3
454
30
25
17
26
1.97
27139--27195
30
1.9
29
85
3
78
38
1
19
40
1.62
39174--39233
12
4.8
12
74
23
52
70
0
28
1
0.97
42617--42770
76
2.0
76
95
3
283
42
20
11
25
1.85
44293--44450
50
3.1
50
83
0
199
31
27
17
24
1.97
44293--44525
25
9.6
25
73
6
165
34
26
15
23
1.95
44441--44478
18
2.1
18
90
0
58
34
28
13
23
1.92
44464--44535
25
2.8
26
81
6
94
41
20
11
26
1.86
44463--44547
25
3.4
25
79
6
84
37
22
11
28
1.89
47205--47275
13
5.2
13
71
18
63
54
0
0
45
0.99
47177--47277
27
3.5
28
85
10
114
51
0
0
47
1.07
47205--47280
27
2.7
27
87
4
116
52
0
0
47
1.00
51466--51666
75
2.7
75
81
1
233
32
24
17
24
1.97
51456--51666
25
8.4
25
78
2
199
32
24
18
25
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57350--57386
17
2.1
18
90
5
58
62
8
5
24
1.44
61792--61841
21
2.4
21
89
0
73
10
32
8
50
1.65
64032--64099
18
3.8
18
72
3
66
50
13
20
16
1.78
64523--64579
24
2.4
24
82
5
71
3
35
0
61
1.13
74084--74138
3
18.3
3
75
20
53
63
3
32
0
1.12
74084--74134
17
2.9
18
80
16
54
62
3
33
0
1.13
74535--74567
17
1.9
17
93
0
57
15
15
12
57
1.65
85454--85498
18
2.8
16
87
12
58
2
37
0
60
1.09
95027--95073
24
2.0
24
87
8
69
48
8
14
27
1.73
112218--112267
21
2.4
21
83
6
66
44
30
14
12
1.81
117208--117257
21
2.4
22
80
10
59
0
34
0
66
0.92
117200--117254
18
3.1
17
86
5
74
0
29
0
70
0.87
131353--131396
23
2.0
22
86
4
61
38
0
15
45
1.47
137933--138176
121
2.0
121
95
1
436
27
17
24
30
1.97
156426--156476
18
2.8
19
85
5
61
72
1
25
0
0.95
156426--156479
21
2.6
21
85
11
67
72
1
25
0
0.95
156870--156908
17
2.2
18
86
13
55
15
12
10
61
1.56
156871--156924
17
3.2
17
78
19
51
16
12
11
59
1.61
160432--160500
34
2.0
34
97
0
129
36
20
24
18
1.95
161560--162456
39
22.6
39
81
5
888
29
28
16
25
1.97
162688--162715
14
2.0
14
100
0
56
71
0
0
28
0.86
163684--163713
14
2.1
14
93
0
51
73
3
6
16
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163761--163808
16
2.9
16
75
12
53
64
2
2
31
1.16
166436--166477
13
3.3
13
87
9
52
78
0
2
19
0.86
172073--172131
21
2.8
22
87
7
79
74
1
10
13
1.14
172931--172973
19
2.3
19
84
8
52
58
4
0
37
1.19
174578--174602
7
3.6
7
100
0
50
24
12
0
64
1.27
176951--177005
27
2.0
27
100
0
110
34
10
29
25
1.90
180820--180891
36
1.9
38
83
13
96
33
2
2
61
1.25
182738--182762
2
12.5
2
100
0
50
0
48
0
52
1.00
186661--186710
19
2.6
20
81
15
61
60
6
0
34
1.21
186661--186719
18
3.2
19
77
20
63
59
6
0
33
1.24

Tables:   1

The End!