Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013258.1 Kokia drynarioides strain JFW-HI SEQ_128278, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  134096

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30395--30530
69
2.0
69
92
0
227
24
11
23
40
1.88
40438--40488
25
2.0
25
100
0
102
33
23
7
35
1.84
45475--45554
21
3.9
21
86
1
117
31
25
15
28
1.95
45475--45571
42
2.3
41
81
8
108
29
27
12
29
1.93
46259--46294
18
1.9
19
88
5
56
25
27
19
27
1.99
53665--53696
17
1.9
16
93
6
55
15
12
9
62
1.54
53815--53876
32
1.9
33
84
12
85
59
8
0
32
1.26
53866--53912
24
1.9
25
86
4
69
55
6
6
31
1.51
59205--59293
32
2.8
31
89
3
115
39
4
17
38
1.71
59230--59285
18
3.3
18
65
27
50
37
5
14
42
1.68
59579--59667
32
2.8
31
89
3
115
39
4
17
38
1.71
59604--59659
18
3.3
18
65
27
50
37
5
14
42
1.68
65074--65175
50
2.0
50
92
0
168
39
35
7
17
1.79
67262--67370
54
2.0
54
92
0
182
26
18
20
34
1.95
71755--71838
37
2.3
37
91
0
132
40
5
8
45
1.59
71769--71842
37
2.0
37
100
0
148
37
5
10
45
1.62
71778--71856
37
2.1
37
90
0
122
41
7
10
40
1.67
72555--72601
24
2.0
24
95
0
85
27
14
12
44
1.82
81465--81502
16
2.3
16
86
13
51
18
5
0
76
0.97
82625--82661
6
6.0
6
93
3
56
16
21
0
62
1.33
86260--86299
19
2.1
19
90
0
62
42
7
2
47
1.45
87418--87526
53
2.1
53
94
0
191
20
20
9
50
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88643--88797
27
5.7
27
84
0
184
30
15
18
36
1.92
91602--91630
14
2.0
15
93
6
51
44
6
0
48
1.29
91735--91781
20
2.4
20
80
13
53
63
0
2
34
1.06
91851--91885
17
2.1
16
89
5
52
31
0
0
68
0.90
95959--96002
23
2.0
22
81
4
52
36
0
2
61
1.09
105172--105218
24
2.1
22
88
11
69
29
14
4
51
1.62

Tables:   1

The End!