Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013266.1 Kokia drynarioides strain JFW-HI SEQ_128287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40485

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--748
30
6.8
30
78
8
173
35
19
2
41
1.67
550--748
60
3.4
56
82
6
202
35
19
3
41
1.67
6244--6437
99
2.0
99
81
4
230
37
16
28
17
1.92
6822--7079
116
2.2
116
80
6
290
25
30
16
27
1.97
6822--7093
39
7.0
39
79
4
273
25
30
16
27
1.97
7126--7711
208
2.8
207
83
3
700
37
15
21
25
1.92
7356--8044
331
2.1
331
85
2
911
38
15
21
24
1.91
7561--7836
123
2.2
123
84
2
349
40
16
19
23
1.91
7561--7892
123
2.7
123
81
4
348
40
15
18
24
1.90
7684--8507
208
4.0
207
85
3
965
38
16
21
24
1.92
7807--7977
85
2.0
85
84
4
220
36
14
21
27
1.92
7893--7984
48
1.9
48
82
4
114
35
13
25
26
1.92
8018--8175
85
1.9
85
87
0
235
36
17
24
22
1.95
7687--8486
415
1.9
417
84
2
1070
38
16
21
24
1.93
9648--9697
16
3.1
16
71
5
55
58
12
8
22
1.59
9632--9706
33
2.2
32
76
17
80
62
10
6
20
1.49
10801--11096
30
10.0
30
79
8
241
35
2
24
37
1.70
11700--11746
23
2.1
23
88
4
69
23
4
6
65
1.33
12649--12694
6
7.7
6
85
9
67
52
0
0
47
1.00
12657--12691
17
2.1
17
100
0
70
57
0
0
42
0.99
13222--13378
85
1.8
85
88
0
242
24
22
13
39
1.90
13090--13939
209
4.1
209
90
0
1306
22
20
17
39
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13426--13596
85
2.0
85
82
4
211
19
20
18
40
1.91
25895--26246
30
11.7
30
77
7
304
39
1
24
34
1.65
26922--26970
22
2.2
21
79
10
53
20
6
6
67
1.35
28249--28361
30
3.8
30
85
2
147
32
23
5
38
1.77
40399--40433
4
8.8
4
93
0
61
48
22
2
25
1.64
40431--40466
2
18.0
2
94
0
63
50
2
0
47
1.15

Tables:   1

The End!