Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013287.1 Kokia drynarioides strain JFW-HI SEQ_128308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67398

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--178
20
1.9
22
85
10
57
65
7
0
27
1.20
3767--3816
19
2.5
20
87
6
75
58
6
12
24
1.56
6047--6104
26
2.2
26
96
3
107
17
22
17
43
1.88
6047--6112
26
2.5
26
90
7
89
15
21
19
43
1.87
8686--8765
37
2.2
37
90
0
133
38
25
15
21
1.92
11918--11947
2
15.0
2
100
0
60
50
0
0
50
1.00
23526--23565
15
2.7
14
84
7
53
40
2
0
57
1.12
24111--24164
15
3.3
15
74
18
54
44
0
1
53
1.11
27178--27372
30
6.6
29
78
9
173
39
23
0
36
1.59
27187--27370
58
3.1
59
78
10
155
39
24
0
35
1.60
27344--27486
30
4.9
29
76
10
112
37
28
2
30
1.71
27420--27567
30
5.0
30
74
11
108
36
28
2
32
1.71
32416--32447
16
2.1
16
88
11
50
28
0
9
62
1.26
42375--42505
65
2.0
65
100
0
262
38
24
6
30
1.80
50095--50188
31
3.1
31
80
9
104
41
6
11
40
1.67
50565--50604
13
3.2
12
86
13
55
32
0
0
67
0.91
54264--54339
36
2.1
36
87
0
107
27
23
11
36
1.90
56952--56983
16
2.0
16
100
0
64
12
43
31
12
1.80
57026--57165
33
4.0
34
74
17
133
7
5
19
67
1.35
57030--57112
22
3.9
22
82
7
109
4
4
20
69
1.25
57127--57398
24
11.7
23
72
13
137
9
6
16
67
1.39
57030--57228
22
8.9
22
72
11
102
9
6
17
67
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57172--57404
12
20.2
12
73
11
182
9
6
16
68
1.36
57147--57252
49
2.2
49
96
0
194
12
6
13
67
1.39
57167--57402
67
3.4
67
86
4
294
9
6
16
67
1.39
57533--57616
38
2.2
38
79
12
91
26
0
8
65
1.21
59541--59741
45
4.5
45
81
2
190
37
16
25
20
1.93
62566--62595
15
2.0
15
100
0
60
46
13
6
33
1.69
63222--63279
20
2.8
21
71
10
57
39
0
5
55
1.22
67163--67248
25
3.4
25
72
13
68
20
12
26
39
1.89

Tables:   1

The End!