Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013304.1 Kokia drynarioides strain JFW-HI SEQ_128326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112305

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11757--11795
21
2.0
20
90
10
62
51
0
15
33
1.44
11831--12140
128
2.4
128
96
0
575
33
19
20
27
1.96
18246--18300
23
2.4
23
87
3
76
43
23
25
7
1.79
27182--27430
37
7.0
37
77
8
228
16
18
30
34
1.93
27210--27266
28
2.0
28
100
0
114
21
17
28
33
1.96
27261--27330
21
3.6
21
70
18
69
15
20
30
34
1.93
34527--34753
37
6.2
37
83
1
285
15
17
31
35
1.91
34527--34753
110
2.1
111
86
0
312
15
17
31
35
1.91
39849--39890
18
2.4
18
84
4
50
2
16
0
80
0.81
40467--40515
17
2.9
17
81
0
62
48
12
18
20
1.79
47500--47545
24
1.9
24
95
0
83
15
4
17
63
1.47
62257--62721
231
2.0
231
97
0
885
44
7
15
32
1.75
64925--64957
15
2.2
15
89
10
50
75
0
0
24
0.80
66247--66286
19
2.2
19
86
13
57
0
17
10
72
1.11
66848--68212
189
7.2
189
84
1
1523
24
25
16
32
1.96
67230--67931
95
7.4
93
65
15
271
25
25
16
32
1.96
66898--68212
567
2.3
569
84
1
1685
24
25
16
32
1.96
69285--69343
6
10.2
6
78
7
59
1
20
0
77
0.85
69284--69368
17
4.8
17
72
17
66
3
17
0
78
0.88
69277--69368
26
3.4
27
76
18
93
3
17
0
79
0.86
69277--69366
5
16.8
5
76
13
65
3
17
0
78
0.88
69282--69373
12
7.8
12
73
17
50
4
16
0
79
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74062--74092
8
3.9
8
91
0
53
80
0
0
19
0.71
94524--94598
24
3.1
24
96
0
132
54
10
12
22
1.67
96524--96586
24
2.6
24
74
0
63
53
11
11
23
1.68
97524--97622
6
17.0
6
67
15
57
44
1
3
51
1.23
97524--97620
17
5.6
17
80
2
104
43
1
3
52
1.23
97570--97628
18
3.3
18
72
11
59
50
1
1
45
1.21
98332--98372
22
1.9
21
85
5
55
53
4
2
39
1.35
98427--98453
4
6.8
4
100
0
54
77
0
0
22
0.76
99425--99795
29
12.6
29
77
7
318
33
30
3
32
1.75
99425--99795
59
6.3
58
85
5
379
33
30
3
32
1.75
111023--111071
22
2.2
22
96
0
89
32
20
8
38
1.82

Tables:   1

The End!