Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013308.1 Kokia drynarioides strain JFW-HI SEQ_128330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74313

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2826--3017
96
2.0
95
82
9
230
37
14
19
28
1.91
3241--3357
29
4.1
28
64
21
64
29
5
30
34
1.79
3307--3415
57
1.9
58
86
1
157
31
6
27
34
1.82
3243--3437
28
6.8
28
68
15
80
30
4
30
34
1.78
3241--3448
30
7.2
30
69
15
91
29
5
31
33
1.80
5256--5298
18
2.4
18
88
3
61
46
0
4
48
1.22
5256--5354
17
5.5
17
71
13
63
49
2
3
45
1.29
5275--5350
39
1.9
39
81
0
89
50
2
2
44
1.30
6382--6419
19
2.0
19
90
10
60
68
0
0
31
0.90
6603--6647
21
2.1
22
87
4
65
48
2
2
46
1.26
7222--7278
29
2.0
28
83
6
71
56
1
3
38
1.27
7455--7768
170
1.8
170
84
6
423
44
4
6
44
1.49
21456--21498
22
2.0
22
100
0
86
37
20
32
9
1.85
28700--28776
33
2.4
33
81
14
90
64
1
0
33
1.01
28683--28776
31
3.1
31
71
15
81
62
2
0
35
1.07
31800--31863
18
3.4
18
73
24
60
60
6
0
32
1.21
36589--36623
18
2.0
18
88
5
54
8
14
0
77
0.99
38255--38292
2
19.0
2
100
0
76
50
0
0
50
1.00
39078--39154
34
2.3
35
81
6
95
58
5
2
33
1.34
39128--39184
26
2.2
25
84
9
71
59
3
0
36
1.14
39130--39186
25
2.2
25
84
9
71
59
3
0
36
1.14
47196--47291
18
5.3
18
76
16
101
41
0
0
58
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47219--47293
27
2.8
27
95
0
141
44
0
0
56
0.99
47190--47293
54
1.9
54
94
3
183
42
0
0
57
0.98
52723--52789
33
1.9
36
88
8
104
56
4
31
7
1.47
53697--53842
23
6.4
23
77
7
104
15
21
20
43
1.88
53762--53812
22
2.3
23
93
3
86
13
17
27
41
1.87
57876--58037
84
1.9
84
97
0
306
34
15
17
32
1.91
59700--59765
17
3.8
17
85
2
87
45
1
1
51
1.19
59696--59765
12
6.0
12
74
12
65
44
1
1
52
1.18
60445--60573
15
8.5
15
68
19
63
50
3
3
43
1.33
60435--60491
12
4.8
12
77
0
51
49
1
3
45
1.29
60535--60574
3
13.3
3
94
0
71
65
0
0
35
0.93
61568--61748
90
2.0
88
83
6
222
39
29
2
28
1.71
61538--61747
29
7.1
29
76
3
168
39
28
2
30
1.71
61997--62181
96
1.9
96
85
4
257
30
18
14
36
1.91
73526--74096
205
2.8
205
87
3
763
36
19
22
21
1.95

Tables:   1

The End!