Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013309.1 Kokia drynarioides strain JFW-HI SEQ_128331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54016

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
769--926
23
6.6
23
85
9
142
11
24
22
42
1.86
854--925
25
2.8
25
95
2
126
11
26
22
40
1.87
4993--5029
18
2.0
19
94
5
67
43
0
0
56
0.99
4995--5035
18
2.4
18
84
8
59
48
0
0
51
1.00
5008--5076
26
2.6
25
80
10
75
46
0
1
52
1.09
5000--5040
19
2.2
18
86
4
55
48
0
0
51
1.00
10093--10126
18
1.9
18
88
5
52
38
20
17
23
1.93
29980--30043
21
3.1
21
84
6
69
67
6
0
26
1.14
33483--33509
11
2.5
11
100
0
54
40
0
0
59
0.98
46525--46561
18
2.1
18
89
0
56
78
5
5
10
1.08
46577--46618
17
2.4
18
92
4
68
42
0
57
0
0.99
46700--46783
31
2.7
31
81
5
91
40
2
2
54
1.26
46918--46959
21
2.0
21
85
0
57
61
2
7
28
1.35
47980--48132
76
2.0
76
98
0
297
32
7
33
26
1.84
48932--48997
29
2.3
29
97
0
123
46
10
7
34
1.67

Tables:   1

The End!