Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013312.1 Kokia drynarioides strain JFW-HI SEQ_128334, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100858

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2395--2431
18
2.1
18
89
0
56
48
0
27
24
1.51
4851--4899
26
2.0
26
84
8
66
18
8
4
69
1.30
4950--4974
2
12.5
2
100
0
50
48
0
0
52
1.00
8780--8863
41
2.0
42
97
2
161
33
8
26
32
1.86
9028--9065
19
2.1
19
85
5
51
50
5
10
34
1.59
12612--12663
18
2.9
18
79
0
59
28
7
21
42
1.80
13602--13631
15
2.0
15
100
0
60
33
0
26
40
1.57
21353--21403
24
2.1
25
88
3
77
37
0
0
62
0.95
23492--23543
24
2.2
24
89
0
77
55
1
0
42
1.10
27610--27663
25
2.2
26
83
16
78
35
1
0
62
1.06
29892--30020
64
2.0
64
100
0
258
37
15
15
31
1.89
32134--32185
18
3.0
18
81
10
56
46
1
0
51
1.12
34202--34244
22
2.1
19
83
12
50
44
9
0
46
1.35
34446--34513
26
2.5
28
81
11
72
32
0
1
66
1.01
34447--34529
11
6.9
12
68
27
52
32
0
1
66
1.00
35374--35523
75
2.0
75
96
0
273
44
4
10
41
1.56
36217--36276
6
10.2
6
81
3
77
43
3
0
53
1.17
36203--36247
17
2.6
18
89
3
65
37
4
2
55
1.32
36221--36288
18
3.6
20
79
15
74
44
2
0
52
1.16
36217--36275
24
2.5
23
91
2
91
44
3
0
52
1.17
38216--38463
29
8.4
29
71
13
159
35
25
4
34
1.75
38216--38484
58
4.6
58
81
8
264
36
25
4
33
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38265--38467
57
3.5
57
85
7
214
34
27
4
33
1.77
38240--38492
60
4.3
57
80
9
205
35
26
4
34
1.76
38388--38484
29
3.3
28
70
23
74
37
24
5
32
1.78
42972--43018
21
2.2
21
84
0
58
17
14
6
61
1.53
46569--46599
6
5.2
6
92
0
53
0
48
16
35
1.46
50333--50371
15
2.7
15
84
4
53
51
5
0
43
1.24
50331--50372
22
1.9
22
90
0
66
50
4
0
45
1.23
50412--50436
2
12.5
2
100
0
50
48
0
0
52
1.00
52311--52344
3
11.3
3
100
0
68
67
0
0
32
0.91
86196--86308
47
2.4
47
90
0
172
29
12
20
38
1.89
88807--88860
21
2.3
24
79
20
62
16
9
3
70
1.28
89777--89834
28
2.1
28
96
0
107
32
6
31
29
1.84
93489--93535
25
2.0
23
87
8
67
31
2
6
59
1.34
94017--94070
23
2.3
23
84
6
65
35
25
18
20
1.95
96957--96998
9
4.3
9
83
16
57
83
0
16
0
0.65

Tables:   1

The End!