Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013317.1 Kokia drynarioides strain JFW-HI SEQ_128339, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  142592

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117--144
12
2.3
12
100
0
56
42
14
0
42
1.45
663--712
16
3.2
16
73
21
52
34
0
6
60
1.21
972--1014
21
2.1
21
86
4
61
58
13
2
25
1.48
1370--1415
21
2.2
21
92
0
74
0
34
0
65
0.93
11006--11055
25
2.0
25
96
0
91
50
0
0
50
1.00
13189--13231
22
2.0
22
90
0
68
39
6
9
44
1.64
16602--16637
18
2.0
18
94
0
63
52
2
0
44
1.15
41466--41515
13
3.9
13
72
15
50
18
4
0
78
0.91
45018--45068
24
2.1
24
100
0
102
27
7
7
56
1.55
45018--45080
24
2.6
24
92
0
90
30
9
9
50
1.66
46963--47037
24
3.1
24
92
0
114
26
10
9
53
1.66
49088--49126
2
19.5
2
94
0
69
48
2
0
48
1.15
49199--49223
3
8.3
3
100
0
50
32
68
0
0
0.90
50651--50711
32
2.0
32
84
9
83
0
26
4
68
1.09
54336--54371
18
1.9
19
88
5
56
75
0
13
11
1.06
63399--63430
13
2.5
13
95
5
57
46
15
6
31
1.71
69608--69656
20
2.4
21
82
3
64
73
2
0
24
0.94
74213--74635
30
14.2
29
77
9
295
37
2
23
36
1.69
74417--74465
15
3.3
15
71
5
55
40
2
20
36
1.64
74277--74610
58
5.7
58
78
7
248
37
2
23
37
1.68
74980--75038
30
2.0
30
83
6
75
35
16
0
47
1.47
76539--77546
49
20.5
49
73
9
571
16
30
17
36
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76516--77546
99
10.5
98
73
7
573
16
29
17
35
1.92
76517--77545
148
7.0
148
77
4
797
16
30
17
35
1.92
76615--77242
245
2.5
244
83
2
720
16
30
17
36
1.91
85523--86009
30
16.4
30
76
7
356
37
2
22
37
1.67
85542--86009
89
5.2
88
78
7
410
37
2
22
37
1.67
85542--86009
119
3.9
117
78
4
438
37
2
22
37
1.67
86879--86925
14
3.3
14
80
11
51
63
0
0
36
0.94
97532--97566
2
17.5
2
100
0
70
51
0
0
48
1.00
98251--98309
30
2.0
30
83
9
77
18
13
13
54
1.71
109174--109216
18
2.4
18
80
7
52
46
2
0
51
1.13
115592--115640
23
2.2
22
82
10
55
63
2
10
24
1.37
122215--122250
12
3.0
12
91
0
54
25
2
19
52
1.59
126517--126543
6
4.5
6
100
0
54
66
0
33
0
0.92
133532--133605
28
2.6
29
78
18
82
32
18
24
24
1.97
137051--137088
19
2.0
20
84
5
51
44
5
2
47
1.39
137275--137309
4
8.2
4
87
12
52
74
0
0
25
0.82
137268--137308
14
3.1
14
86
10
59
73
0
0
26
0.84
138195--138228
16
2.1
17
94
5
61
14
5
17
61
1.52
141464--141508
23
1.9
24
90
4
74
37
0
6
55
1.26

Tables:   1

The End!