Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01013332.1 Kokia drynarioides strain JFW-HI SEQ_128354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100904

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
895--929
6
5.8
6
100
0
70
51
0
31
17
1.45
3255--3287
7
4.7
7
88
11
50
33
0
12
54
1.37
4473--4867
52
7.6
52
90
0
574
27
13
23
35
1.93
18873--18905
16
2.1
16
88
11
50
18
3
0
78
0.87
23473--23551
40
2.0
40
85
5
106
26
16
27
29
1.97
37824--37850
8
3.4
8
100
0
54
25
0
0
74
0.83
42050--42089
20
2.0
20
100
0
80
35
5
15
45
1.68
42289--42324
15
2.5
15
90
4
56
52
0
16
30
1.44
42896--42935
21
1.9
21
90
10
64
32
5
0
62
1.17
45569--45595
13
2.1
13
100
0
54
55
0
0
44
0.99
46310--46339
12
2.6
12
94
5
53
73
0
0
26
0.84
50666--50714
20
2.5
20
80
6
55
34
4
14
46
1.63
50803--50866
6
11.0
6
76
6
69
45
1
1
51
1.20
50803--50866
29
2.2
29
80
5
85
45
1
1
51
1.20
50775--50866
17
5.4
17
81
6
114
42
1
3
53
1.24
52620--52861
30
8.1
30
75
11
142
35
24
4
35
1.77
52620--52875
60
4.3
58
73
11
187
34
23
5
36
1.77
64930--66048
209
5.4
209
88
1
1425
35
19
22
22
1.96
66481--66554
11
7.0
11
71
18
50
39
2
2
55
1.28
66482--66556
6
13.0
6
75
8
75
41
2
2
53
1.29
66482--66556
17
4.4
17
82
1
96
41
2
2
53
1.29
66493--66553
23
2.7
22
82
7
77
39
3
3
54
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67174--67250
3
25.7
3
94
0
136
67
2
0
29
1.04
68103--68270
59
2.8
58
82
9
189
36
24
3
35
1.73
68090--68399
88
3.5
87
78
9
267
35
25
4
34
1.78
68089--68399
58
5.3
56
76
11
238
35
25
4
34
1.77
68103--68399
29
10.2
29
75
11
207
36
25
4
34
1.77
83056--83542
93
5.3
93
83
3
590
24
22
18
33
1.97
83054--83542
187
2.6
185
83
3
603
24
23
18
33
1.97
86416--86444
14
2.1
14
100
0
58
41
6
13
37
1.72
93721--93772
21
2.5
21
81
6
61
25
13
30
30
1.94
95841--96037
52
3.8
52
85
3
245
24
15
25
34
1.94

Tables:   1

The End!